RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MAP2K4P45985 399 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 CDK5Q00535 292 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF155Q12901 538 aaPredicted RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF846Q147U1 533 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 GRM7Q14831 915 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 MBOAT2Q6ZWT7 520 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 USP43Q70EL4 1123 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 B3GNT7Q8NFL0 401 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF559Q9BR84 538 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 G6PC3Q9BUM1 346 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 MND1Q9BWT6 205 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 ERVMER34-1Q9H9K5 563 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 ADAP2Q9NPF8 381 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 MMACHCQ9Y4U1 282 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 FITM1A5D6W6 292 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 CHST10O43529 356 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 SEMA7AO75326 666 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 EPPINO95925 133 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 GIPRP48546 466 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 CLK1P49759 484 aaKnown RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 C21orf59P57076 290 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 EEF1A1P68104 462 aaKnown RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 C1orf61Q13536 156 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 SLC46A3Q7Z3Q1 461 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 RBM45Q8IUH3 476 aaKnown RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 GRAMD2AQ8IUY3 354 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 SLC41A3Q96GZ6 507 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 CCNL2Q96S94 520 aaPredicted RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 MRPS18AQ9NVS2 196 aaKnown RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 SEC14L4Q9UDX3 406 aa10.57□□□□□ -0.72
NFKB1-205ENST00000505458 GOLGA4Q13439 2230 aaKnown RBP10.57□□□□□ -0.72
NFKB1-205ENST00000505458 CELA2BP08218 269 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 TYRP1P17643 537 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 PSPHP78330 225 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF613Q6PF04 617 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF836Q6ZNA1 936 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZER1Q7Z7L7 766 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 VRK2Q86Y07 508 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 KMT5CQ86Y97 462 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 WDR36Q8NI36 951 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 CLDN23Q96B33 292 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ANKRD9Q96BM1 317 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 TPSD1Q9BZJ3 242 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 C11orf16Q9NQ32 467 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 CHCHD3Q9NX63 227 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 PRODH2Q9UF12 536 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 KCNE3Q9Y6H6 103 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 SLC9B1P1A6NJY1 282 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 DYRK3O43781 588 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 BRINP1O60477 761 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZBTB11O95625 1053 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ADORA3P0DMS8 318 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF182P17025 639 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 RPL6Q02878 288 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 STX4Q12846 297 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF542PQ5EBM4 170 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ADCK1Q86TW2 530 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 C11orf74Q86VG3 221 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 UBALD2Q8IYN6 164 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 CDK20Q8IZL9 346 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 RBM18Q96H35 190 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 PRTFDC1Q9NRG1 225 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 CFL2Q9Y281 166 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 MRPS2Q9Y399 296 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 A0A087WUU8 490 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 RHPN2P1A8MT19 583 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 RDH16O75452 317 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF12P17014 697 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 LCN1P31025 176 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 TRHRP34981 398 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 GPR3P46089 330 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 MAZP56270 477 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 GINS1Q14691 196 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ARMC4Q5T2S8 1044 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 Q6ZPB1 254 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF440Q8IYI8 595 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 AMER2Q8N7J2 671 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 OR7G1Q8NGA0 311 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 TMEM163Q8TC26 289 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 GPR151Q8TDV0 419 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 DNASE2BQ8WZ79 361 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZHX1-C8orf76Q96EF9 292 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 DGAT2Q96PD7 388 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ISYNA1Q9NPH2 558 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 GPR83Q9NYM4 423 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 CCDC59Q9P031 241 aaKnown RBP10.56□□□□□ -0.72
NFKB1-205ENST00000505458 CDH10Q9Y6N8 788 aa10.56□□□□□ -0.72
NFKB1-205ENST00000505458 ZNF860A6NHJ4 632 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 EFCAB9A8MZ26 197 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 AIREO43918 545 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 MGAT2Q10469 447 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 PROKR2Q8NFJ6 384 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TRIM2Q9C040 744 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 KLHL25Q9H0H3 589 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 TMEM27Q9HBJ8 222 aa10.55□□□□□ -0.72
NFKB1-205ENST00000505458 DIMT1Q9UNQ2 313 aaKnown RBP10.55□□□□□ -0.72
NFKB1-205ENST00000505458 SGK494L7N484 410 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms