RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ITCHQ96J02 903 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 RILPQ96NA2 401 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 OR52E6Q96RD3 313 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 PANX1Q96RD7 426 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ADOQ96SZ5 270 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 VKORC1Q9BQB6 163 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 TRIM4Q9C037 500 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 NSRP1Q9H0G5 558 aaKnown RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ARMC7Q9H6L4 198 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 COQ3Q9NZJ6 369 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 CALML5Q9NZT1 146 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 MARCOQ9UEW3 520 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF835Q9Y2P0 537 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 GPR45Q9Y5Y3 372 aa9.04□□□□□ -0.96
NR1I3-220ENST00000505005 SHANK1Q9Y566 2161 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 A0A087WZY1 265 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 FAM234BA2RU67 622 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GMNCA6NCL1 334 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 RFXANKO14593 260 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 SNPHO15079 494 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 ICOSLGO75144 302 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 HMGN2P05204 90 aaKnown RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 HPNP05981 417 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 VIMP08670 466 aaKnown RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 NUDT7P0C024 238 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 ZCCHC18P0CG32 403 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 TBXA2RP21731 343 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 MATN1P21941 496 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 FKBP2P26885 142 aaKnown RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GDF1P27539 372 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 CHI3L1P36222 383 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 PEX19P40855 299 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 MAP3K8P41279 467 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 CA7P43166 264 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GYS2P54840 703 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 DSCR4P56555 118 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 FBXW4P57775 412 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GPR85P60893 370 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 HPCAP84074 193 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 FOXO1Q12778 655 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GAB1Q13480 694 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 EIF2S3LQ2VIR3 472 aaKnown RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 FAM174BQ3ZCQ3 159 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 C6orf120Q7Z4R8 191 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 METTL25Q8N6Q8 603 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 OR4A15Q8NGL6 344 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 FAM57AQ8TBR7 257 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 MIPOL1Q8TD10 442 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 ASB5Q8WWX0 329 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 JADE3Q92613 823 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 HGDQ93099 445 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 CIDECQ96AQ7 238 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 PPP1R36Q96LQ0 422 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 JSRP1Q96MG2 331 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 CCDC115Q96NT0 180 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF317Q96PQ6 595 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 PAQR5Q9NXK6 330 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 TUBA8Q9NY65 449 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-220ENST00000505005 PPP4R1LQ9P1A2 415 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 ACAD8Q9UKU7 415 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 OSGIN2Q9Y236 505 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 NTNG1Q9Y2I2 539 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 WIF1Q9Y5W5 379 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 POLEQ07864 2286 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 SVILO95425 2214 aa9.03□□□□□ -0.96
NR1I3-220ENST00000505005 GTF3C1Q12789 2109 aa9.02□□□□□ -0.96
NR1I3-220ENST00000505005 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.96
NR1I3-220ENST00000505005 NINQ8N4C6 2090 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 TRGV8A0A0C4DH27 118 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 A0A1W2PS29 197 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ALG1L2C9J202 215 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ANKRD28O15084 1053 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 NDUFB5O43674 189 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 CDC40O60508 579 aaKnown RBP eCLIP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 EDF1O60869 148 aaKnown RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 UGT2B11O75310 529 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 STX11O75558 287 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 TRAPPC6AO75865 159 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 C6orf47O95873 294 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 CHMP24386 653 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 PTPN6P29350 595 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 SRD5A2P31213 254 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 EVI2BP34910 448 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 SOAT1P35610 550 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 EIF1P41567 113 aaKnown RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 DNASE1L1P49184 302 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 KHKP50053 298 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 POLR2JP52435 117 aaKnown RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 AQP5P55064 265 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 HBA1P69905 142 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 DUSP2Q05923 314 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 SQLEQ14534 574 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 LASP1Q14847 261 aaKnown RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 TOMM20Q15388 145 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 MAPRE2Q15555 327 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 BCL2A1Q16548 175 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF630Q2M218 657 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-220ENST00000505005 ZNF385BQ569K4 471 aa9.02□□□□□ -0.97
NR1I3-220ENST00000505005 CMPK2Q5EBM0 449 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms