RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ABCA3Q99758 1704 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 SPATA31A1Q5TZJ5 1347 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 MFSD11O43934 449 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 OPN1MWP04001 364 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 OPN1MW2P0DN77 364 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 OPN1MW3P0DN78 364 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 NELFEP18615 380 aaKnown RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 DTYMKP23919 212 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 IL13RA1P78552 427 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ARHGAP40Q5TG30 622 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 FAM109BQ6ICB4 259 aaPredicted RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 WDR73Q6P4I2 378 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 TMEM104Q8NE00 496 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 OR10H4Q8NGA5 316 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 SLC41A2Q96JW4 573 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 SLC2A13Q96QE2 648 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ACTR3CQ9C0K3 210 aaPredicted RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 TDRD3Q9H7E2 651 aaKnown RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ASF1BQ9NVP2 202 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 METTL1Q9UBP6 276 aaKnown RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 SCML2Q9UQR0 700 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 BCL2L11O43521 198 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ZNF207O43670 478 aaKnown RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 RHOCP08134 193 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 STAG3L3P0CL85 134 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 RHOAP61586 193 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 IFI44Q8TCB0 444 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 DVL3Q92997 716 aaPredicted RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ECHDC3Q96DC8 303 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 C20orf85Q9H1P6 137 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 RDH14Q9HBH5 336 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 VPS29Q9UBQ0 182 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 KCNK7Q9Y2U2 307 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 PCDHA2Q9Y5H9 948 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 QSER1Q2KHR3 1735 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 GPR182O15218 404 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 PI15O43692 258 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 MED6O75586 246 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ZBTB7AO95365 584 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 SERPINA5P05154 406 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 DRD2P14416 443 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 RFX3P48380 749 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 TBX4P57082 545 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ARF6P62330 175 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 NAAAQ02083 359 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ALG10BQ5I7T1 473 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 MCOLN1Q9GZU1 580 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ZBTB20Q9HC78 741 aaPredicted RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 STARD7Q9NQZ5 370 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 LRFN2Q9ULH4 789 aa5.78□□□□□ -1.48
LINC02397-201ENST00000504409 ZFC3H1O60293 1989 aaKnown RBP5.78□□□□□ -1.48
LINC02397-201ENST00000504409 CCDC163A0A0D9SF12 145 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 ZNF736B4DX44 427 aaPredicted RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 GPR39O43194 453 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 HNRNPLP14866 589 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 ELK4P28324 431 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 ERFP50548 548 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 HSD11B2P80365 405 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 RAB35Q15286 201 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 GUCA2BQ16661 112 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 TECRLQ5HYJ1 363 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 FRG2Q64ET8 278 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 FNDC9Q8TBE3 224 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 NPRL2Q8WTW4 380 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 FAM46BQ96A09 425 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 LRCH3Q96II8 777 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 FRG2BQ96QU4 278 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 SH2B3Q9UQQ2 575 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 AKAP11Q9UKA4 1901 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 SDHDO14521 159 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 TRAF3IP2O43734 574 aaPredicted RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 SH3BGRLO75368 114 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 APEHP13798 732 aaKnown RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 GRK6P43250 576 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 MARCKSL1P49006 195 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 PCSK7Q16549 785 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 RTL8BQ17RB0 113 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 NRARPQ7Z6K4 114 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 VRK2Q86Y07 508 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 FBXO15Q8NCQ5 510 aaPredicted RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 PAQR8Q8TEZ7 354 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 C1orf74Q96LT6 269 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 ABI2Q9NYB9 513 aaPredicted RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 OARD1Q9Y530 152 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 TCP10L2B9ZVM9 353 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 OR2T1O43869 369 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 DCNP07585 359 aaKnown RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 CPEP16870 476 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 CCND3P30281 292 aaPredicted RBP5.77□□□□□ -1.49
LINC02397-201ENST00000504409 HOXA9P31269 272 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 PSEN2P49810 448 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 CLDN10P78369 228 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 SLC35A2P78381 396 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 ILKQ13418 452 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 CEACAM7Q14002 265 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 CILP2Q8IUL8 1156 aa5.77□□□□□ -1.49
LINC02397-201ENST00000504409 TCTEX1D1Q8N7M0 179 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms