RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 RPP25Q9BUL9 199 aaKnown RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 MOB1AQ9H8S9 216 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 COPS7BQ9H9Q2 264 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 WDR41Q9HAD4 459 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 DDX19AQ9NUU7 478 aaKnown RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 MARCH5Q9NX47 278 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 MAGEB16A2A368 324 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 PRRG1O14668 218 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 OGTO15294 1046 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 CLDN3O15551 220 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 GALR3O60755 368 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 NME6O75414 186 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 PDGFBP01127 241 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 MCF2P10911 925 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 OR1D2P34982 312 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 RIDAP52758 137 aaKnown RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 PEX3P56589 373 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ST8SIA6P61647 398 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ZFP36L1Q07352 338 aaKnown RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 RBBP4Q09028 425 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 TYSND1Q2T9J0 566 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 LRRC38Q5VT99 294 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF774Q6NX45 483 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 GET4Q7L5D6 327 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 KLHDC8AQ8IYD2 350 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 TMEM105Q8N8V8 129 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 C8orf46Q8TAG6 207 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 LIPHQ8WWY8 451 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF707Q96C28 371 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 CDKN2AIPNLQ96HQ2 116 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 B3GALT6Q96L58 329 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 TAAR6Q96RI8 345 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 TSPAN18Q96SJ8 248 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF559Q9BR84 538 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 CCDC28BQ9BUN5 200 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ADNPQ9H2P0 1102 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 PLEKHA3Q9HB20 300 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 UBE2TQ9NPD8 197 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 DNAJC17Q9NVM6 304 aaKnown RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 ETV7Q9Y603 341 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 AUP1Q9Y679 476 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 STYXL1Q9Y6J8 313 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 F5P12259 2224 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 DMXL1Q9Y485 3027 aa4.58□□□□□ -1.68
NIPBL-203ENST00000503274 MTCL1Q9Y4B5 1905 aaKnown RBP4.58□□□□□ -1.68
NIPBL-203ENST00000503274 A0A087X0K7 114 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 TRGV8A0A0C4DH27 118 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 SMIM28A0A1B0GU29 152 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 GTPBP10A4D1E9 387 aaKnown RBP4.57□□□□□ -1.68
NIPBL-203ENST00000503274 A4D1N5 150 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 SRRM5B3KS81 715 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 K7EQG2 157 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 CCL16O15467 120 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 TOM1L1O75674 476 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 CLTAP09496 248 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 KCNE1P15382 129 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 NBL1P41271 181 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 MAGEA9P43362 315 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 ZFP36L2P47974 494 aaKnown RBP4.57□□□□□ -1.68
NIPBL-203ENST00000503274 OSTNP61366 133 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 YWHAHQ04917 246 aaPredicted RBP4.57□□□□□ -1.68
NIPBL-203ENST00000503274 ANGPT1Q15389 498 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 SIX1Q15475 284 aaPredicted RBP4.57□□□□□ -1.68
NIPBL-203ENST00000503274 ACKR1Q16570 336 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 KRT71Q3SY84 523 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 LYPLAL1Q5VWZ2 237 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 TPGS2Q68CL5 300 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 TMEM64Q6YI46 380 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 LINC00696Q6ZRV3 163 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 TIPARPQ7Z3E1 657 aaKnown RBP4.57□□□□□ -1.68
NIPBL-203ENST00000503274 C4orf32Q8N8J7 132 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 LEMD2Q8NC56 503 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF461Q8TAF7 563 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 FGF13Q92913 245 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 NABP1Q96AH0 204 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 S100A14Q9HCY8 104 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF319Q9P2F9 582 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 MTRRQ9UBK8 725 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 SMC3Q9UQE7 1217 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 SH3GLB1Q9Y371 365 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 NOTCH3Q9UM47 2321 aa4.57□□□□□ -1.68
NIPBL-203ENST00000503274 CEP250Q9BV73 2442 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 E9PMD0 336 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 SLC33A1O00400 549 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-203ENST00000503274 SLC16A4O15374 487 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 N4BP1O75113 896 aaKnown RBP4.56□□□□□ -1.68
NIPBL-203ENST00000503274 ECI2O75521 394 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 CRCPO75575 148 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 GLCEO94923 617 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 SKILP12757 684 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 FOLR2P14207 255 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 LMO2P25791 158 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 MAGEB1P43366 347 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 ARPP19P56211 112 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 SLC34A1Q06495 639 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 PLD1Q13393 1074 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 HTR4Q13639 388 aa4.56□□□□□ -1.68
NIPBL-203ENST00000503274 ECSCRQ19T08 205 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms