RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 EEF1E1-BLOC1S5C9J1V9 151 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 NPIPB8E9PQR5 432 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 AZIN1O14977 448 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 EEF1E1O43324 174 aaKnown RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 ATP8B1O43520 1251 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 COQ9O75208 318 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 IGKV1D-16P01601 117 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 TMIGD3P0DMS9 266 aaPredicted RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 EFNA1P20827 205 aaPredicted RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 PRPH2P23942 346 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 DPP4P27487 766 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 ALDH3A1P30838 453 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 NTSP30990 170 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 DGKQP52824 942 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 NAA20P61599 178 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 HSPB3Q12988 150 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 STX5Q13190 355 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 RCAN2Q14206 197 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 RFTN2Q52LD8 501 aaPredicted RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 EXOC3L1Q86VI1 746 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 FADS6Q8N9I5 356 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 OR2M3Q8NG83 312 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 OR5M1Q8NGP8 315 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 LINC01560Q8TB33 94 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 INTS12Q96CB8 462 aaKnown RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 SFXN2Q96NB2 322 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 TSSK3Q96PN8 268 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 MECRQ9BV79 373 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 POLDIP3Q9BY77 421 aaKnown RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 DDX18Q9NVP1 670 aaKnown RBP14.73□□□□□ -0.05
SCLT1-204ENST00000503215 C1orf109Q9NX04 203 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 JKAMPQ9P055 326 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 SLC17A7Q9P2U7 560 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 GIMAP2Q9UG22 337 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 DKKL1Q9UK85 242 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 CBLCQ9ULV8 474 aa14.73□□□□□ -0.05
SCLT1-204ENST00000503215 MED12LQ86YW9 2145 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 FAM221AA4D161 298 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 H0YC42 278 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 H3BQF6 201 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 SLC28A1O00337 649 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 TRIM13O60858 407 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 TGM6O95932 706 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 ZNF708P17019 499 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 SDC1P18827 310 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 GABRA3P34903 492 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 RFX3P48380 749 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 IST1P53990 364 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 TPD52P55327 224 aaPredicted RBP14.72□□□□□ -0.05
SCLT1-204ENST00000503215 CLDN15P56746 228 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 SF3B4Q15427 424 aaKnown RBP eCLIP14.72□□□□□ -0.055e-6■■■■□ 26.7
SCLT1-204ENST00000503215 UGT3A2Q3SY77 523 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 CYP27C1Q4G0S4 372 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 ENPP6Q6UWR7 440 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 APOOLQ6UXV4 268 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 SPNS3Q6ZMD2 512 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 IKBIPQ70UQ0 350 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 GALNT10Q86SR1 603 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 MARCH3Q86UD3 253 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 GCNT2Q8N0V5 402 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 BANPQ8N9N5 519 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 OR4K17Q8NGC6 315 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 PIK3R3Q92569 461 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 FCRL1Q96LA6 429 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 LMF2Q9BU23 707 aaKnown RBP14.72□□□□□ -0.05
SCLT1-204ENST00000503215 PPCSQ9HAB8 311 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 SLC24A3Q9HC58 644 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 EQTNQ9NQ60 294 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 RASSF1Q9NS23 344 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 PPP4R1LQ9P1A2 415 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 CLCF1Q9UBD9 225 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 WBP11Q9Y2W2 641 aaKnown RBP14.72□□□□□ -0.05
SCLT1-204ENST00000503215 MRPS18CQ9Y3D5 142 aaKnown RBP14.72□□□□□ -0.05
SCLT1-204ENST00000503215 DNAJC15Q9Y5T4 150 aa14.72□□□□□ -0.05
SCLT1-204ENST00000503215 HRNRQ86YZ3 2850 aaPredicted RBP14.71□□□□□ -0.05
SCLT1-204ENST00000503215 MTORP42345 2549 aa14.71□□□□□ -0.05
SCLT1-204ENST00000503215 A6NNC1 897 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 SPAG7O75391 227 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 RCBTB2O95199 551 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 IL33O95760 270 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 CREB1P16220 341 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 ARRB2P32121 409 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 OPRM1P35372 400 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 GCKP35557 465 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 ART1P52961 327 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 VSNL1P62760 191 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 FLYWCH1Q4VC44 716 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 KANK2Q63ZY3 851 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 TRABD2AQ86V40 505 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 CNPY4Q8N129 248 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 DUSP19Q8WTR2 217 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 FAM222BQ8WU58 562 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 NUDT8Q8WV74 236 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 FAM111AQ96PZ2 611 aa14.71□□□□□ -0.06
SCLT1-204ENST00000503215 CLEC4MQ9H2X3 399 aaPredicted RBP14.71□□□□□ -0.06
SCLT1-204ENST00000503215 LSM1O15116 133 aaKnown RBP14.7□□□□□ -0.06
SCLT1-204ENST00000503215 RGS14O43566 566 aa14.7□□□□□ -0.06
SCLT1-204ENST00000503215 GMFGO60234 142 aa14.7□□□□□ -0.06
SCLT1-204ENST00000503215 IL18BPO95998 194 aa14.7□□□□□ -0.06
SCLT1-204ENST00000503215 SUCLG1P53597 346 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms