RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MED1Q15648 1581 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 C15orf38-AP3S2A0A0A6YYH1 394 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 RNF212BA8MTL3 300 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 PRSS44E7EML9 344 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 PDLIM1O00151 329 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 UGT2B4P06133 528 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 CCDC159P0C7I6 412 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OR9G9P0C7N8 305 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZSCAN5DPP0CG00 497 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 PSMA2P25787 234 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 UCP1P25874 307 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 CHI3L1P36222 383 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OSTNP61366 133 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 IL9RQ01113 521 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 RIPK1Q13546 671 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 TFDP1Q14186 410 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 SELPLGQ14242 412 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 TMEM30BQ3MIR4 351 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 MOGAT2Q3SYC2 334 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 LINC01620Q4KN68 170 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 MUC21Q5SSG8 566 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 GDPGP1Q6ZNW5 385 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 NUFIP2Q7Z417 695 aaKnown RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 SAMD12Q8N8I0 201 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZNRF1Q8ND25 227 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OR4F17Q8NGA8 305 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OR52J3Q8NH60 311 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 RLN3Q8WXF3 142 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OSTF1Q92882 214 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 ADIPOR1Q96A54 375 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 NABP1Q96AH0 204 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 BIRC7Q96CA5 298 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 ELMO2Q96JJ3 720 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 SENP8Q96LD8 212 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OR4F4Q96R69 305 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 LGMNQ99538 433 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 TRIM6Q9C030 488 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 STRADBQ9C0K7 418 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 DHX33Q9H6R0 707 aaKnown RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 SP140LQ9H930 580 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 DCAF13Q9NV06 445 aaKnown RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 DUS2Q9NX74 493 aaKnown RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 CIDEBQ9UHD4 219 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 DHRS7Q9Y394 339 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 OR10H1Q9Y4A9 318 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 SCAF11Q99590 1463 aaKnown RBP4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 LMTK2Q8IWU2 1503 aa4.41□□□□□ -1.7
HMGB1P3-201ENST00000502802 BCLAF3A2AJT9 711 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ASB14A6NK59 587 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ARHGEF33A8MVX0 844 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 PPIAL4DF5H284 164 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 CLDN5O00501 218 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 TOM1O60784 492 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 FRAT2O75474 233 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 PALMO75781 387 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 PDE5AO76074 875 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 DUS4LO95620 317 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 MT-ND1P03886 318 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 RGS4P49798 205 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 SLC7A2P52569 658 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 VCPP55072 806 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 FKBP3Q00688 224 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 LRRC74AQ0VAA2 488 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 CALCOCO2Q13137 446 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 FASTKD3Q14CZ7 662 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF146Q15072 292 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 MS4A18Q3C1V0 323 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 RABGAP1LQ5R372 815 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 TMEM184AQ6ZMB5 413 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF841Q6ZN19 808 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZCCHC7Q8N3Z6 543 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF614Q8N883 585 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 OR1B1Q8NGR6 318 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 PNPT1Q8TCS8 783 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 HCAR2Q8TDS4 363 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 UPRTQ96BW1 309 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 AKR1E2Q96JD6 320 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 CABLES2Q9BTV7 478 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 MOB1AQ9H8S9 216 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ELL3Q9HB65 397 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 BARHL2Q9NY43 387 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF580Q9UK33 172 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 EXOGQ9Y2C4 368 aaKnown RBP4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ADGRL2O95490 1459 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 E9PCH4 1651 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 TET3O43151 1660 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 EFCAB6Q5THR3 1501 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 ANKRD30AQ9BXX3 1397 aa4.4□□□□□ -1.71
HMGB1P3-201ENST00000502802 NOS1P29475 1434 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 IGHV4-30-2A0A087WSY4 118 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 MBLAC1A4D2B0 266 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 CTAGE5O15320 804 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 OR1F1O43749 312 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 BCAS1O75363 584 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 TM7SF2O76062 418 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 SNX4O95219 450 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 IGHG1P01857 330 aa4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 RPS2P15880 293 aaKnown RBP4.39□□□□□ -1.71
HMGB1P3-201ENST00000502802 SRPXP78539 464 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms