RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 GPR137Q96N19 417 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 CCDC28BQ9BUN5 200 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 LRRC61Q9BV99 259 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 DEFB129Q9H1M3 183 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 LIME1Q9H400 295 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 HAUS4Q9H6D7 363 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 VCPKMTQ9H867 229 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 SLC25A19Q9HC21 320 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 GDF3Q9NR23 364 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 COPS7AQ9UBW8 275 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 MUTYHQ9UIF7 546 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 MYH6P13533 1939 aa5.13□□□□□ -1.59
NEDD4-203ENST00000502612 TRBV2A0A0J9YWF9 115 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 TMCO5BA8MYB1 307 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 NEDD8-MDP1E9PL57 170 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 FBP2O00757 339 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 CETN3O15182 167 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 DCXO43602 365 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 OR6B1O95007 311 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 GYPCP04921 128 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 TRIM49P0CI25 452 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 TRIM49CP0CI26 452 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 CASP1P29466 404 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 OXTRP30559 389 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 TNFRSF4P43489 277 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 ZFP36L2P47974 494 aaKnown RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 NLRP11P59045 1033 aaKnown RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 TSTA3Q13630 321 aaPredicted RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 EXOSC7Q15024 291 aaKnown RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 PDK1Q15118 436 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 P2RY14Q15391 338 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 SPA17Q15506 151 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 MS4A18Q3C1V0 323 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 MPPE1Q53F39 396 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 HERC4Q5GLZ8 1057 aaPredicted RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 NKAIN2Q5VXU1 208 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 RTL6Q6ICC9 239 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 NIPA1Q7RTP0 329 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 APTXQ7Z2E3 356 aaKnown RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 BNIPLQ7Z465 357 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 ZNRF1Q8ND25 227 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 ESAMQ96AP7 390 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 RPGRIP1Q96KN7 1286 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 CCDC42Q96M95 316 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 RCHY1Q96PM5 261 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 PLIN2Q99541 437 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 RIT2Q99578 217 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 TIPINQ9BVW5 301 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 DDX47Q9H0S4 455 aaKnown RBP5.12□□□□□ -1.59
NEDD4-203ENST00000502612 SIRPDQ9H106 197 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 MYOZ2Q9NPC6 264 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 FAM153AQ9UHL3 310 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 UBE4BO95155 1302 aa5.12□□□□□ -1.59
NEDD4-203ENST00000502612 IGHV3OR16-10A0A075B7F0 116 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 IGKV3D-15A0A087WSY6 115 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 A0A0J9YWU9 116 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 A0A0U1RRA0 63 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CLRN2A0PK11 232 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ASB14A6NK59 587 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 USP27XA6NNY8 438 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 YJEFN3A6XGL0 299 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 EEF2KO00418 725 aaKnown RBP5.11□□□□□ -1.59
NEDD4-203ENST00000502612 PDXKO00764 312 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 TRAFD1O14545 582 aaPredicted RBP5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ATP8B1O43520 1251 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ALPPP05187 535 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CCDC172P0C7W6 258 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ALPPL2P10696 532 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ETV5P41161 510 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 STARD6P59095 220 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CKAP4Q07065 602 aaKnown RBP5.11□□□□□ -1.59
NEDD4-203ENST00000502612 WASHC5Q12768 1159 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 USH1GQ495M9 461 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CCDC40Q4G0X9 1142 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CEP55Q53EZ4 464 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 LIPJQ5W064 366 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 GSG1LQ6UXU4 331 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 WDR88Q6ZMY6 472 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 KIAA1328Q86T90 577 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 GPBP1Q86WP2 473 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 APOBEC3FQ8IUX4 373 aaKnown RBP5.11□□□□□ -1.59
NEDD4-203ENST00000502612 BATF2Q8N1L9 274 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CHDHQ8NE62 594 aaPredicted RBP5.11□□□□□ -1.59
NEDD4-203ENST00000502612 LRRC15Q8TF66 581 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 CRYGNQ8WXF5 182 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ANKRD7Q92527 254 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 PNPLA2Q96AD5 504 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 SLC45A3Q96JT2 553 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 TAAR6Q96RI8 345 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 TEKT3Q9BXF9 490 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 NMUR1Q9HB89 426 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 DEPPQ9NTK1 212 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 TRIM10Q9UDY6 481 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 TSPAN16Q9UKR8 245 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 ODF2LQ9ULJ1 636 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 BZW2Q9Y6E2 419 aaKnown RBP5.11□□□□□ -1.59
NEDD4-203ENST00000502612 RNF215Q9Y6U7 377 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 FER1L5A0AVI2 2057 aa5.11□□□□□ -1.59
NEDD4-203ENST00000502612 IGLV4-3A0A075B6K6 122 aa5.1□□□□□ -1.59
NEDD4-203ENST00000502612 TRGV8A0A0C4DH27 118 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms