RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ANGPT1Q15389 498 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 ZNF528Q3MIS6 628 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 LYPLAL1Q5VWZ2 237 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 ZNF730Q6ZMV8 503 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 SLFN11Q7Z7L1 901 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 CACUL1Q86Y37 369 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 CCDC71Q8IV32 467 aaPredicted RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 NAXDQ8IW45 347 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 OR8H2Q8N162 312 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 TMEM105Q8N8V8 129 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 FLVCR1-AS1Q8TAF5 88 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 RANBP9Q96S59 729 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 POMKQ9H5K3 350 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 VAT1LQ9HCJ6 419 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 Q9UF83 564 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 MAD2L2Q9UI95 211 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 ITGA11Q9UKX5 1188 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 ZFP37Q9Y6Q3 630 aaPredicted RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 ZFHX2Q9C0A1 2572 aaPredicted RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 CEP250Q9BV73 2442 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 SELENOFO60613 162 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 LRP3O75074 770 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 PDGFBP01127 241 aaPredicted RBP3.78□□□□□ -1.8
MDM2-220ENST00000496959 CALCAP01258 141 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 MGMTP16455 207 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 CA8P35219 290 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 SOAT1P35610 550 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 ID1P41134 155 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 PRKCIP41743 596 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 RGRP47804 291 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 MARCH8Q5T0T0 291 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 PM20D1Q6GTS8 502 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 CASC1Q6TDU7 716 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 NIPA1Q7RTP0 329 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 ZNF589Q86UQ0 364 aaPredicted RBP3.78□□□□□ -1.8
MDM2-220ENST00000496959 MRPL43Q8N983 215 aaKnown RBP3.78□□□□□ -1.8
MDM2-220ENST00000496959 Q8NFD4 153 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 VN1R2Q8NFZ6 395 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 CKAP2Q8WWK9 683 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 C17orf62Q9BQA9 187 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 ATG101Q9BSB4 218 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 LSG1Q9H089 658 aaKnown RBP3.78□□□□□ -1.8
MDM2-220ENST00000496959 ASB8Q9H765 288 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 PSTPIP2Q9H939 334 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 ADAM22Q9P0K1 906 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 GINS2Q9Y248 185 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 TMED7Q9Y3B3 224 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 UBIAD1Q9Y5Z9 338 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 ETV7Q9Y603 341 aa3.78□□□□□ -1.8
MDM2-220ENST00000496959 ACACBO00763 2458 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 SPAG17Q6Q759 2223 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 GSTTP1A0A1W2PQM5 241 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CCSO14618 274 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CDX4O14627 284 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 IFIT3O14879 490 aaKnown RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 FHP07954 510 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 C17orf58Q2M2W7 97 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 IQCCQ4KMZ1 466 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CEP55Q53EZ4 464 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CASC4Q6P4E1 433 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CWC27Q6UX04 472 aaKnown RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 GPR65Q8IYL9 337 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 SLC22A18ASQ8N1D0 253 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 URGCPQ8TCY9 931 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 CCDC12Q8WUD4 166 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 CASD1Q96PB1 797 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 INTS14Q96SY0 518 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 BAG1Q99933 345 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 JPH2Q9BR39 696 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 TMEM175Q9BSA9 504 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 DEFB126Q9BYW3 111 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CWH43Q9H720 699 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 ZNF302Q9NR11 478 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 MRPL17Q9NRX2 175 aaKnown RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 GPR173Q9NS66 373 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 ZNF275Q9NSD4 429 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 RBM28Q9NW13 759 aaKnown RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 NFKBIL1Q9UBC1 381 aaPredicted RBP3.77□□□□□ -1.81
MDM2-220ENST00000496959 EPS15L1Q9UBC2 864 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 RAB23Q9ULC3 237 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 GREB1Q4ZG55 1949 aa3.77□□□□□ -1.81
MDM2-220ENST00000496959 CLUHO75153 1309 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 KLF18A0A0U1RQI7 1052 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 CCDC69A6NI79 296 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 HIDE1A8MVS5 230 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 E7ENQ6 273 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 MCF2LO15068 1137 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 DKC1O60832 514 aaKnown RBP eCLIP3.76□□□□□ -1.81
MDM2-220ENST00000496959 OR6A2O95222 327 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 SIX3O95343 332 aaPredicted RBP3.76□□□□□ -1.81
MDM2-220ENST00000496959 CXCL14O95715 111 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 RLN1P04808 185 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 APOA4P06727 396 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 HSD17B1P14061 328 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 FASP25445 335 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 PPP2R1BP30154 601 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 SFNP31947 248 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 IER3P46695 156 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 FNTAP49354 379 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms