RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 ARRDC2Q8TBH0 407 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 PHOSPHO2Q8TCD6 241 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 GNPDA2Q8TDQ7 276 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ZFPM2Q8WW38 1151 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SELENOMQ8WWX9 145 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ZNF689Q96CS4 500 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 TMEM41AQ96HV5 264 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 UFSP2Q9NUQ7 469 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 OR6C2Q9NZP2 312 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 AKAP7Q9P0M2 348 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 OARD1Q9Y530 152 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 LRRC72A6NJI9 287 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 DBX1A6NMT0 343 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 EFCAB7A8K855 629 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SNRPGP15A8MWD9 76 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 DISC1C4P0D8 188 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 GABRPO00591 440 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 UBE2CO00762 179 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SCAMP1O15126 338 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 HCRTO43612 131 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 LCMT2O60294 686 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 FZD7O75084 574 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 NDUFS6O75380 124 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 GCM2O75603 506 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 EGFP01133 1207 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 IGLV3-25P01717 112 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ACP2P11117 423 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 POU2F1P14859 743 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 POU3F2P20265 443 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 DDX6P26196 483 aaKnown RBP eCLIP8.54□□□□□ -1.04
HPS4-217ENST00000496385 CTNNB1P35222 781 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 PGDP52209 483 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 WNT3P56703 355 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 RAB5BP61020 215 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 EIF4EBP2Q13542 120 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 SEC23BQ15437 767 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 EIF2S3LQ2VIR3 472 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 CDNFQ49AH0 187 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 GGTA1PQ4G0N0 100 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 CRB2Q5IJ48 1285 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ELFN2Q5R3F8 820 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 CEACAM20Q6UY09 585 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 NKAIN4Q8IVV8 208 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SLC30A8Q8IWU4 369 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SIDT2Q8NBJ9 832 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 OR13C4Q8NGS5 318 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 RGMAQ96B86 450 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 TEFMQ96QE5 360 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 TSNAXQ99598 290 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 DPH2Q9BQC3 489 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 CPEB1Q9BZB8 566 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 ACPTQ9BZG2 426 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ELAC1Q9H777 363 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 WDR26Q9H7D7 661 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ZFP57Q9NU63 452 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SPATA6Q9NWH7 488 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 FBXL3Q9UKT7 428 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 DHRS7Q9Y394 339 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 BACE2Q9Y5Z0 518 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ARL5AQ9Y689 179 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 TDRD15B5MCY1 1934 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 SMIM28A0A1B0GU29 152 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 PRR23D1E9PI22 279 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 CACNB4O00305 520 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 FFAR3O14843 346 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 GPR42O15529 346 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 HPXP02790 462 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 PRR23D2P0DMB1 279 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 EPB42P16452 691 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 LAG3P18627 525 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 PAICSP22234 425 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 OR1G1P47890 313 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TAF6P49848 677 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 XKP51811 444 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ZNF140P52738 457 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 SMSP52788 366 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 GMFBP60983 142 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ECH1Q13011 328 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 SNTB2Q13425 540 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 HTR4Q13639 388 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 SNTB1Q13884 538 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 XKR6Q5GH73 641 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TPRA1Q86W33 373 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 SIAH3Q8IW03 269 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TBC1D19Q8N5T2 526 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 MS4A3Q96HJ5 214 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 FUBP3Q96I24 572 aaKnown RBP eCLIP8.53□□□□□ -1.04
HPS4-217ENST00000496385 TSSK3Q96PN8 268 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TCF25Q9BQ70 676 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 FAIM2Q9BWQ8 316 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 BTBD1Q9H0C5 482 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 C20orf85Q9H1P6 137 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 CWH43Q9H720 699 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 GPN1Q9HCN4 374 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms