RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 HSCBQ8IWL3 235 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 FGFRL1Q8N441 504 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 MAPK1IP1LQ8NDC0 245 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 RFESDQ8TAC1 157 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 FNDC8Q8TC99 324 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 RAB7BQ96AH8 199 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 UPRTQ96BW1 309 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 FEM1AQ9BSK4 669 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 UBXN6Q9BZV1 441 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 DHX33Q9H6R0 707 aaKnown RBP4.32□□□□□ -1.72
SSR3-208ENST00000496050 B9D1Q9UPM9 204 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 GMPPBQ9Y5P6 360 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 SNED1Q8TER0 1413 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 CLDN5O00501 218 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 TM9SF1O15321 606 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 RAMP1O60894 148 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 IGFBP1P08833 259 aaPredicted RBP4.31□□□□□ -1.72
SSR3-208ENST00000496050 WNT2P09544 360 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 PSMA5P28066 241 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 PRPHP41219 470 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 CCDC57Q2TAC2 916 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 ANKDD1AQ495B1 522 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 USH1GQ495M9 461 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 SLC36A3Q495N2 470 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 NADK2Q4G0N4 442 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 BLOC1S2Q6QNY1 142 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 SLC22A18ASQ8N1D0 253 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 ZNF540Q8NDQ6 660 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 DENND6BQ8NEG7 585 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 OR5AU1Q8NGC0 362 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 ITLN1Q8WWA0 313 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 C11orf24Q96F05 449 aaPredicted RBP4.31□□□□□ -1.72
SSR3-208ENST00000496050 AKR1E2Q96JD6 320 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 ZBP1Q9H171 429 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 FAM120CQ9NX05 1096 aaKnown RBP4.31□□□□□ -1.72
SSR3-208ENST00000496050 IMPAD1Q9NX62 359 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 PAK5Q9P286 719 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 GALPQ9UBC7 116 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 SNX6Q9UNH7 406 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 NTNG1Q9Y2I2 539 aa4.31□□□□□ -1.72
SSR3-208ENST00000496050 TDRD15B5MCY1 1934 aaKnown RBP4.31□□□□□ -1.72
SSR3-208ENST00000496050 SF3B1O75533 1304 aaKnown RBP eCLIP4.3□□□□□ -1.72
SSR3-208ENST00000496050 TRIM49BA6NDI0 452 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 A8MUI8 341 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 E9PAM4 449 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 PI15O43692 258 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 CHRNA1P02708 482 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 H2AFZP0C0S5 128 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 SDC1P18827 310 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 POU3F4P49335 361 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 HMGCS2P54868 508 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 SNTB2Q13425 540 aaKnown RBP4.3□□□□□ -1.72
SSR3-208ENST00000496050 CAMK4Q16566 473 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 PPP1R3AQ16821 1122 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 REG3GQ6UW15 175 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 PRSS48Q7RTY5 328 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 OR2L2Q8NH16 312 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 ZBED6CLQ96FA7 236 aaPredicted RBP4.3□□□□□ -1.72
SSR3-208ENST00000496050 RPP25Q9BUL9 199 aaKnown RBP4.3□□□□□ -1.72
SSR3-208ENST00000496050 SLC25A51Q9H1U9 297 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 GPN2Q9H9Y4 310 aaPredicted RBP4.3□□□□□ -1.72
SSR3-208ENST00000496050 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 RBM28Q9NW13 759 aaKnown RBP4.3□□□□□ -1.72
SSR3-208ENST00000496050 FER1L5A0AVI2 2057 aa4.3□□□□□ -1.72
SSR3-208ENST00000496050 KIF16BQ96L93 1317 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 GSAPA4D1B5 854 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 DUX1O43812 170 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 SRPX2O60687 465 aaPredicted RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 TBX19O60806 448 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 PIGRP01833 764 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ANXA3P12429 323 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 BCKDHAP12694 445 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ATP6V1C1P21283 382 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 CDH5P33151 784 aaPredicted RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 IFNAR2P48551 515 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ACADVLP49748 655 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 LINC01620Q4KN68 170 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 MEDAGQ5VYS4 303 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ZNF600Q6ZNG1 722 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 GRAMD2AQ8IUY3 354 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ZDHHC21Q8IVQ6 265 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ZNF485Q8NCK3 441 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 OR2T34Q8NGX1 318 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 ZNF671Q8TAW3 534 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 MYLPFQ96A32 169 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 TRIM44Q96DX7 344 aaPredicted RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 DHTKD1Q96HY7 919 aaPredicted RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 PIWIL1Q96J94 861 aaKnown RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 ATOH8Q96SQ7 321 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 SLC30A2Q9BRI3 323 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 PUS3Q9BZE2 481 aaKnown RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 EXOSC3Q9NQT5 275 aaKnown RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 ELOVL2Q9NXB9 296 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 CRLS1Q9UJA2 301 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 DDX49Q9Y6V7 483 aaKnown RBP4.29□□□□□ -1.72
SSR3-208ENST00000496050 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 USP6P35125 1406 aa4.29□□□□□ -1.72
SSR3-208ENST00000496050 PPIAL4CA0A0B4J2A2 164 aa4.28□□□□□ -1.72
SSR3-208ENST00000496050 ZSCAN5CA6NGD5 496 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms