RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 METTL7AQ9H8H3 244 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 THUMPD1Q9NXG2 353 aaKnown RBP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-235ENST00000495515 CORO2BQ9UQ03 480 aa15.72■□□□□ 0.11
HDAC6-235ENST00000495515 TNRC6AQ8NDV7 1962 aaKnown RBP15.71■□□□□ 0.11
HDAC6-235ENST00000495515 EVPLLA8MZ36 301 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 B8ZZF3 427 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CLIC1O00299 241 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 NDUFAB1O14561 156 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 SNX4O95219 450 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 NPPAP01160 153 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CRYABP02511 175 aaKnown RBP15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CCL3P10147 92 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 PTPN6P29350 595 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CLK3P49761 638 aaKnown RBP15.71■□□□□ 0.11
HDAC6-235ENST00000495515 SNTA1Q13424 505 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 GTDC1Q4AE62 458 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 DCST2Q5T1A1 773 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 TMEM81Q6P7N7 255 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 FAM180AQ6UWF9 173 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 SULF2Q8IWU5 870 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 OR52N2Q8NGI0 321 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 OR5D16Q8NGK9 328 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 FAM110BQ8TC76 370 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 PNPT1Q8TCS8 783 aaKnown RBP15.71■□□□□ 0.11
HDAC6-235ENST00000495515 XAGE5Q8WWM1 108 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 HGDQ93099 445 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CMTM5Q96DZ9 223 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CCDC106Q9BWC9 280 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 MYLK2Q9H1R3 596 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 SLC6A13Q9NSD5 602 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 KLRF1Q9NZS2 232 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 MAP10Q9P2G4 905 aa15.71■□□□□ 0.11
HDAC6-235ENST00000495515 CNOT11Q9UKZ1 510 aaKnown RBP15.71■□□□□ 0.11
HDAC6-235ENST00000495515 TMEM247A6NEH6 219 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 PRAMEF25A6NGN4 478 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 MRASO14807 208 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 SUV39H1O43463 412 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 OR12D1P0DN82 309 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 CD1EP15812 388 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 CASP3P42574 277 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 CRATP43155 626 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 MEOX1P50221 254 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 CASP9P55211 416 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 GPR85P60893 370 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 KCNJ2P63252 427 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 HPCAP84074 193 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 FADDQ13158 208 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 PRAMEF20Q5VT98 475 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 SLC30A6Q6NXT4 461 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 FIGNL1Q6PIW4 674 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-235ENST00000495515 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 RETREG3Q86VR2 466 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 OR2M7Q8NG81 312 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 BCAS4Q8TDM0 211 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 DOHHQ9BU89 302 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 ANGPTL4Q9BY76 406 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 HOXD1Q9GZZ0 328 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 SERHL2Q9H4I8 314 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 HHATLQ9HCP6 504 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 AGPAT4Q9NRZ5 378 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 GID8Q9NWU2 228 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 VAPAQ9P0L0 249 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 BOKQ9UMX3 212 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-235ENST00000495515 ABCG2Q9UNQ0 655 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 LIPT1Q9Y234 373 aa15.7■□□□□ 0.1
HDAC6-235ENST00000495515 ACOT7O00154 380 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 C1QL1O75973 258 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 COX4I1P13073 169 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 CYP4B1P13584 511 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 HPGDP15428 266 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 HOXB9P17482 250 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-235ENST00000495515 PRDX6P30041 224 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 PLGLB1Q02325 96 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 C19orf57Q0VDD7 668 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 TRMT5Q32P41 509 aaKnown RBP15.69■□□□□ 0.1
HDAC6-235ENST00000495515 ARHGAP11BQ3KRB8 267 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDAC6-235ENST00000495515 REP15Q6BDI9 236 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 DLEU7Q6UYE1 221 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 ZNF843Q8N446 348 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 CISD2Q8N5K1 135 aaKnown RBP15.69■□□□□ 0.1
HDAC6-235ENST00000495515 CHDHQ8NE62 594 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-235ENST00000495515 RAB8BQ92930 207 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 AURKBQ96GD4 344 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-235ENST00000495515 NODALQ96S42 347 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 CGREF1Q99674 301 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 SH3GL1Q99961 368 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 OSBPL11Q9BXB4 747 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 IL1RL2Q9HB29 575 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 POLE3Q9NRF9 147 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 SDHAF3Q9NRP4 125 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 SLC25A37Q9NYZ2 338 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 SLAMF8Q9P0V8 285 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 GMEB1Q9Y692 573 aa15.69■□□□□ 0.1
HDAC6-235ENST00000495515 ATMQ13315 3056 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 TRBV5-3A0A0A0MS03 114 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 G3V3Y1 287 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 HMGN4O00479 90 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms