RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 CCDC25Q86WR0 208 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 PRIMA1Q86XR5 153 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 CCDC116Q8IYX3 515 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 PLD6Q8N2A8 252 aaKnown RBP13.54□□□□□ -0.24
NUP58-214ENST00000495460 TMEM151AQ8N4L1 468 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 PPP1R14CQ8TAE6 165 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 CCL19Q99731 98 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 MRPL46Q9H2W6 279 aaKnown RBP13.54□□□□□ -0.24
NUP58-214ENST00000495460 PTGES2Q9H7Z7 377 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 FANCFQ9NPI8 374 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
NUP58-214ENST00000495460 DKKL1Q9UK85 242 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 AP4B1Q9Y6B7 739 aa13.54□□□□□ -0.24
NUP58-214ENST00000495460 IGLV3-32A0A0A0MS00 114 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 H7C1Q1 480 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 FADS1O60427 444 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 KRT6AP02538 564 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 KRT6BP04259 564 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 POU2F1P14859 743 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 TBXA2RP21731 343 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 IL12BP29460 328 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 CPOXP36551 454 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 ARL1P40616 181 aaPredicted RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 KRT6CP48668 564 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 NR1H2P55055 460 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 MRPS35P82673 323 aaKnown RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 DUSP2Q05923 314 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 RASA2Q15283 850 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 SPIN4Q56A73 249 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 LETMD1Q6P1Q0 360 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 PLEKHM3Q6ZWE6 761 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 Q71RC1 249 aaPredicted RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 EXOC3L1Q86VI1 746 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 CIARTQ8N365 385 aaPredicted RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 METTL25Q8N6Q8 603 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 ZNF845Q96IR2 970 aaPredicted RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 Q96MF0 132 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 NSUN5Q96P11 429 aaKnown RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 PIGQQ9BRB3 760 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 VPS11Q9H270 941 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 SLC35C2Q9NQQ7 365 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 GLRX2Q9NS18 164 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 FARSBQ9NSD9 589 aaKnown RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 C6orf203Q9P0P8 240 aaPredicted RBP13.53□□□□□ -0.24
NUP58-214ENST00000495460 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 ZNF225Q9UK10 706 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 GRID1Q9ULK0 1009 aa13.53□□□□□ -0.24
NUP58-214ENST00000495460 B4DXG7 233 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 ULK1O75385 1050 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 SMNDC1O75940 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
NUP58-214ENST00000495460 EVI2BP34910 448 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 HSD17B3P37058 310 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 RPS3AP61247 264 aaKnown RBP13.52□□□□□ -0.25
NUP58-214ENST00000495460 MRPS25P82663 173 aaKnown RBP13.52□□□□□ -0.25
NUP58-214ENST00000495460 PSG6Q00889 435 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 TMEM44Q2T9K0 475 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 BEX5Q5H9J7 111 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 VWA1Q6PCB0 445 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 CNEP1R1Q8N9A8 125 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 OR2M3Q8NG83 312 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 OR4K17Q8NGC6 315 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 RDH11Q8TC12 318 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 GFM2Q969S9 779 aaKnown RBP13.52□□□□□ -0.25
NUP58-214ENST00000495460 FAM111AQ96PZ2 611 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 FOLH1BQ9HBA9 442 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 GIMAP4Q9NUV9 329 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 FAM120CQ9NX05 1096 aaKnown RBP13.52□□□□□ -0.25
NUP58-214ENST00000495460 KLHL28Q9NXS3 571 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 PPP4R1LQ9P1A2 415 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 HEY2Q9UBP5 337 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.25
NUP58-214ENST00000495460 STK38LQ9Y2H1 464 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 ZNF337Q9Y3M9 751 aa13.52□□□□□ -0.25
NUP58-214ENST00000495460 COQ9O75208 318 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 PSMG1O95456 288 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 AVPP01185 164 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 CCKARP32238 428 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 CLK3P49761 638 aaKnown RBP13.51□□□□□ -0.25
NUP58-214ENST00000495460 PSMD4P55036 377 aaKnown RBP13.51□□□□□ -0.25
NUP58-214ENST00000495460 CORO7P57737 925 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 PPP2R2BQ00005 443 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 C17orf67Q0P5P2 114 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 LTB4RQ15722 352 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 ETFDHQ16134 617 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 ADAM5Q6NVV9 412 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 NPSR1Q6W5P4 371 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 MTBPQ96DY7 904 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 PIK3IP1Q96FE7 263 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 ZNF382Q96SR6 550 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 MDFIQ99750 246 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 XPR1Q9UBH6 696 aa13.51□□□□□ -0.25
NUP58-214ENST00000495460 C19orf53Q9UNZ5 99 aaPredicted RBP13.51□□□□□ -0.25
NUP58-214ENST00000495460 CCDC151A5D8V7 595 aa13.5□□□□□ -0.25
NUP58-214ENST00000495460 MYO1GB0I1T2 1018 aa13.5□□□□□ -0.25
NUP58-214ENST00000495460 MANBAO00462 879 aa13.5□□□□□ -0.25
NUP58-214ENST00000495460 KLF4O43474 513 aa13.5□□□□□ -0.25
NUP58-214ENST00000495460 SOX30O94993 753 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms