RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 C16orf45Q96MC5 204 aaPredicted RBP19.96■□□□□ 0.79
HDDC3-203ENST00000494993 BBS4Q96RK4 519 aa19.96■□□□□ 0.79
HDDC3-203ENST00000494993 SIRT5Q9NXA8 310 aa19.96■□□□□ 0.79
HDDC3-203ENST00000494993 TIMM22Q9Y584 194 aa19.96■□□□□ 0.79
HDDC3-203ENST00000494993 SERTM1A2A2V5 107 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 SMNDC1O75940 238 aaKnown RBP eCLIP19.95■□□□□ 0.78
HDDC3-203ENST00000494993 ABHD2P08910 425 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 ANXA4P09525 319 aaPredicted RBP19.95■□□□□ 0.78
HDDC3-203ENST00000494993 DDCP20711 480 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF763Q0D2J5 394 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 VWA1Q6PCB0 445 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 UBQLNLQ8IYU4 475 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 OR2M3Q8NG83 312 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 STARD4Q96DR4 205 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 C18orf12Q96KH6 178 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 KCNA7Q96RP8 456 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 DSN1Q9H410 356 aa19.95■□□□□ 0.78
HDDC3-203ENST00000494993 NSD1Q96L73 2696 aaPredicted RBP19.95■□□□□ 0.78
HDDC3-203ENST00000494993 RAI1Q7Z5J4 1906 aaPredicted RBP19.94■□□□□ 0.78
HDDC3-203ENST00000494993 A0A087WV62 115 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 CCDC151A5D8V7 595 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 SLC22A20A6NK97 555 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 MYO1GB0I1T2 1018 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 PCYT1AP49585 367 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 FAM27E3Q08E93 113 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 PRSS53Q2L4Q9 553 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 GLE1Q53GS7 698 aaKnown RBP19.94■□□□□ 0.78
HDDC3-203ENST00000494993 SH2D4BQ5SQS7 431 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 CXorf67Q86X51 503 aaPredicted RBP19.94■□□□□ 0.78
HDDC3-203ENST00000494993 MEIOBQ8N635 442 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 CNEP1R1Q8N9A8 125 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 CDC26Q8NHZ8 85 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 ABCG2Q9UNQ0 655 aa19.94■□□□□ 0.78
HDDC3-203ENST00000494993 ABCA2Q9BZC7 2435 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 FADS1O60427 444 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 SLITRK5O94991 958 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 JUNP05412 331 aaKnown RBP19.93■□□□□ 0.78
HDDC3-203ENST00000494993 HK1P19367 917 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 MC3RP41968 323 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 NCBP2P52298 156 aaKnown RBP eCLIP19.93■□□□□ 0.78
HDDC3-203ENST00000494993 CLDN15P56746 228 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 NKX6-1P78426 367 aaPredicted RBP19.93■□□□□ 0.78
HDDC3-203ENST00000494993 C2orf80Q0P641 193 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 GANABQ14697 944 aaKnown RBP19.93■□□□□ 0.78
HDDC3-203ENST00000494993 CYP27C1Q4G0S4 372 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 SPDYAQ5MJ70 313 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 RAET1LQ5VY80 246 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 SHEQ5VZ18 495 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 MNS1Q8NEH6 495 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 FIG4Q92562 907 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 SMR3AQ99954 134 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 GSTO2Q9H4Y5 243 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 SDHAF3Q9NRP4 125 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 MED11Q9P086 117 aa19.93■□□□□ 0.78
HDDC3-203ENST00000494993 C19orf53Q9UNZ5 99 aaPredicted RBP19.93■□□□□ 0.78
HDDC3-203ENST00000494993 CTIFO43310 598 aaKnown RBP19.92■□□□□ 0.78
HDDC3-203ENST00000494993 CD79BP40259 229 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 KIR2DL2P43627 348 aaPredicted RBP19.92■□□□□ 0.78
HDDC3-203ENST00000494993 EEFSECP57772 596 aaKnown RBP19.92■□□□□ 0.78
HDDC3-203ENST00000494993 STX5Q13190 355 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 FAM71E1Q6IPT2 247 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 TMEM107Q6UX40 140 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 BTLAQ7Z6A9 289 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 PGM2Q96G03 612 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 WFIKKN1Q96NZ8 548 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 FAM111AQ96PZ2 611 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 RTN4RQ9BZR6 473 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 MID1IP1Q9NPA3 183 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 MIEF1Q9NQG6 463 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 KLHL28Q9NXS3 571 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 FLRT3Q9NZU0 649 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 C6orf203Q9P0P8 240 aaPredicted RBP19.92■□□□□ 0.78
HDDC3-203ENST00000494993 GRID1Q9ULK0 1009 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF337Q9Y3M9 751 aa19.92■□□□□ 0.78
HDDC3-203ENST00000494993 H0YC42 278 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 GOLGA8RI6L899 631 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 LINC01387J3KSC0 135 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 SIAH2O43255 324 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 TNFRSF21O75509 655 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 PSMG1O95456 288 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 GSTA1P08263 222 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 INHBBP09529 407 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 ADSLP30566 484 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 SUCLG1P53597 346 aaKnown RBP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 FOXA1P55317 472 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 TPD52P55327 224 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 SIRPAP78324 504 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 LTBQ06643 244 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 DECR1Q16698 335 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF474Q6S9Z5 364 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 ACMSDQ8TDX5 336 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 PINK1Q9BXM7 581 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 OPN3Q9H1Y3 402 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 GLIPR2Q9H4G4 154 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 PTGES2Q9H7Z7 377 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 Q9N2J8 555 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 MYNNQ9NPC7 610 aa19.91■□□□□ 0.78
HDDC3-203ENST00000494993 FAM120CQ9NX05 1096 aaKnown RBP19.91■□□□□ 0.78
HDDC3-203ENST00000494993 ZNF226Q9NYT6 803 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms