RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 UBLCP1Q8WVY7 318 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-208ENST00000494728 CIDECQ96AQ7 238 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-208ENST00000494728 INTS12Q96CB8 462 aaKnown RBP10.54□□□□□ -0.72
VTI1A-208ENST00000494728 TMCO6Q96DC7 493 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 FCRL1Q96LA6 429 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 CXXC4Q9H2H0 198 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 MIEF1Q9NQG6 463 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 GALNT8Q9NY28 637 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 TAS2R9Q9NYW1 312 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 ST6GALNAC2Q9UJ37 374 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 DKKL1Q9UK85 242 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 SHISA8B8ZZ34 492 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 NPIPB8E9PQR5 432 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 HCRTR2O43614 444 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 BCAS2O75934 225 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-208ENST00000494728 CHRNGP07510 517 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 PRPH2P23942 346 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 DPP4P27487 766 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 ARRB2P32121 409 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 MPIP34949 423 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 SUCLG1P53597 346 aaKnown RBP10.53□□□□□ -0.72
VTI1A-208ENST00000494728 HSPB3Q12988 150 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 GAB1Q13480 694 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 EFR3AQ14156 821 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 POU4F3Q15319 338 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 IMPG1Q17R60 797 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 APOOLQ6UXV4 268 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 Q6ZSR9 355 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 GALNT10Q86SR1 603 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 TDRPQ86YL5 185 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 C10orf107Q8IVU9 208 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-208ENST00000494728 CLHC1Q8NHS4 586 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 FBXO30Q8TB52 745 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 FAM222BQ8WU58 562 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 PIK3R3Q92569 461 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 ELP4Q96EB1 424 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 CCDC126Q96EE4 140 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 RMND5BQ96G75 393 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-208ENST00000494728 UCN2Q96RP3 112 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 NPAS1Q99742 590 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 KLHDC3Q9BQ90 382 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 LMF2Q9BU23 707 aaKnown RBP10.53□□□□□ -0.72
VTI1A-208ENST00000494728 DSN1Q9H410 356 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
VTI1A-208ENST00000494728 TAS2R7Q9NYW3 318 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 GIMAP2Q9UG22 337 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 FIS1Q9Y3D6 152 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 OR10H1Q9Y4A9 318 aa10.53□□□□□ -0.72
VTI1A-208ENST00000494728 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 CCDC151A5D8V7 595 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 TUBAL3A6NHL2 446 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 GMFGO60234 142 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 DIAPH2O60879 1101 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 COQ9O75208 318 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 RCBTB2O95199 551 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 IL18BPO95998 194 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 UROSP10746 265 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 CPA3P15088 417 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 SDC1P18827 310 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 KRT4P19013 534 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 EFNA1P20827 205 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-208ENST00000494728 NTSP30990 170 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 CCKARP32238 428 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 OPRM1P35372 400 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 KRT20P35900 424 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 GSTM5P46439 218 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 RFX3P48380 749 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 CLDN20P56880 219 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 RIPPLY3P57055 190 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 RPL38P63173 70 aaKnown RBP10.52□□□□□ -0.73
VTI1A-208ENST00000494728 SORDQ00796 357 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 SLC18A2Q05940 514 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 CCDC153Q494R4 210 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 LIPMQ5VYY2 423 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 KANK2Q63ZY3 851 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 VWA1Q6PCB0 445 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 ENPP6Q6UWR7 440 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 PAMR1Q6UXH9 720 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 ZAR1Q86SH2 424 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 MARCH3Q86UD3 253 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 EXOC3L1Q86VI1 746 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 UBQLNLQ8IYU4 475 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 OR4K17Q8NGC6 315 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 NUDT8Q8WV74 236 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 FIG4Q92562 907 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 WNT2BQ93097 391 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 GIMAP5Q96F15 307 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 OTUB1Q96FW1 271 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-208ENST00000494728 MECRQ9BV79 373 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 SFXN3Q9BWM7 321 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 GATA5Q9BWX5 397 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-208ENST00000494728 STMN4Q9H169 189 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-208ENST00000494728 EQTNQ9NQ60 294 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 MED11Q9P086 117 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 PPP4R1LQ9P1A2 415 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 GRID1Q9ULK0 1009 aa10.52□□□□□ -0.73
VTI1A-208ENST00000494728 A0A1W2PNV4 684 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms