RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	PRKCI	P41743	596 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	FASLG	P48023	281 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	EMP2	P54851	167 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RGS8	P57771	180 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	KRTAP10-5	P60370	271 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PUDP	Q08623	228 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	GALNT2	Q10471	571 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	TFDP1	Q14186	410 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	TRIP13	Q15645	432 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	EFNB3	Q15768	340 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	HSPB2	Q16082	182 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	BAK1	Q16611	211 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ARMCX4	Q5H9R4	360 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ACER2	Q5QJU3	275 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RABGAP1L	Q5R372	815 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	GCNT6	Q5T4J0	391 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM72A	Q5TYM5	149 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RNLS	Q5VYX0	342 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ZNF470	Q6ECI4	717 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM72D	Q6L9T8	149 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RPL13AP3	Q6NVV1	102 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	CERS6	Q6ZMG9	384 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	BBS12	Q6ZW61	710 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	C1orf186	Q6ZWK4	172 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	KCTD9	Q7L273	389 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	TMEM17	Q86X19	198 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM72B	Q86X60	149 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	DHFR2	Q86XF0	187 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RNF113B	Q8IZP6	322 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM58A	Q8N1B3	248 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	WDTC1	Q8N5D0	677 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	SYT14	Q8NB59	555 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ACBD4	Q8NC06	268 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RBM15B	Q8NDT2	890 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	AGBL3	Q8NEM8	1001 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	OR10A7	Q8NGE5	316 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	GRHL3	Q8TE85	626 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRPF31	Q8WWY3	499 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RAB1C	Q92928	201 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ERGIC1	Q969X5	290 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	EXOSC8	Q96B26	276 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	AP2M1	Q96CW1	435 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	HAVCR1	Q96D42	359 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ELP4	Q96EB1	424 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRRC1	Q96M27	445 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	CITED1	Q99966	193 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	CLSTN3	Q9BQT9	956 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	C2orf88	Q9BSF0	95 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PRRG3	Q9BZD7	231 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	OSBPL8	Q9BZF1	889 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	RTN4R	Q9BZR6	473 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCDC90B	Q9GZT6	254 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	SPNS1	Q9H2V7	528 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	MUC13	Q9H3R2	512 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PDZD7	Q9H5P4	517 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	LRRC4	Q9HBW1	653 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	KCNMB3	Q9NPA1	279 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCNB1IP1	Q9NPC3	277 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	MBNL1	Q9NR56	388 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	SDHAF2	Q9NX18	166 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	MS4A12	Q9NXJ0	267 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PLEK2	Q9NYT0	353 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	CISD1	Q9NZ45	108 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ABCD2	Q9UBJ2	740 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	GLS2	Q9UI32	602 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	HAO1	Q9UJM8	370 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	LEF1	Q9UJU2	399 aa	Predicted RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	ACSL5	Q9ULC5	683 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	COPS3	Q9UNS2	423 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	PADI2	Q9Y2J8	665 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	NUBP2	Q9Y5Y2	271 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	KCNE2	Q9Y6J6	123 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	MYH11	P35749	1972 aa		4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	DHX57	Q6P158	1386 aa	Known RBP	4.27	□□□□□ -1.73
CCDC66-222	ENST00000494672	UMODL1	Q5DID0	1318 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672		A0A0U1RQF3	1178 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672		A0A1W2PPV4	95 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672		A0A1W2PRB8	838 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	TUBAL3	A6NHL2	446 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM90A7P	A6NKC0	464 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	OR52A4P	A6NMU1	304 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	ERI2	A8K979	691 aa	Known RBP	4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM90A22P	A8MWA6	464 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM90A12P	A8MX19	464 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	FAM90A23P	A8MXZ1	464 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	ZNF587B	E7ETH6	402 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCDC188	H7C350	402 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	CCS	O14618	274 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	SGCE	O43556	437 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	CHP2	O43745	196 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	HCN1	O60741	890 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	HUS1	O60921	280 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	N4BP1	O75113	896 aa	Known RBP	4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	PDE9A	O76083	593 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	SNAI1	O95863	264 aa	Predicted RBP	4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	IGHV2-70	P01814	119 aa		4.26	□□□□□ -1.73
CCDC66-222	ENST00000494672	GPI	P06744	558 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms