RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CIDECQ96AQ7 238 aaPredicted RBP8.71□□□□□ -1.02
MSH5-218ENST00000494646 TSSK3Q96PN8 268 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 FAM111AQ96PZ2 611 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 MECRQ9BV79 373 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 RTN4RQ9BZR6 473 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 OR2B2Q9GZK3 357 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 IQCGQ9H095 443 aaKnown RBP8.71□□□□□ -1.02
MSH5-218ENST00000494646 STMN4Q9H169 189 aaPredicted RBP8.71□□□□□ -1.02
MSH5-218ENST00000494646 LIME1Q9H400 295 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 TUBB1Q9H4B7 451 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 CALHM2Q9HA72 323 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 LRTM1Q9HBL6 345 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 EQTNQ9NQ60 294 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 DDX18Q9NVP1 670 aaKnown RBP8.71□□□□□ -1.02
MSH5-218ENST00000494646 C1orf109Q9NX04 203 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 TAS2R7Q9NYW3 318 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 SLC17A7Q9P2U7 560 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GIMAP2Q9UG22 337 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 DKKL1Q9UK85 242 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 WIF1Q9Y5W5 379 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 ITPR3Q14573 2671 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 A0A087WV62 115 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 MBD3L4A6NDZ8 208 aaPredicted RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 MBD3L3A6NE82 208 aaPredicted RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 MBD3L5A6NJ08 208 aaPredicted RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 CLCA1A8K7I4 914 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 TMEM233B4DJY2 109 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 EEF1E1-BLOC1S5C9J1V9 151 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 PLOD2O00469 737 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 EEF1E1O43324 174 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 FADS1O60427 444 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 COQ9O75208 318 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 CTAG2O75638 210 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 CHRNGP07510 517 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 TMIGD3P0DMS9 266 aaPredicted RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 CREB1P16220 341 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 HK1P19367 917 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 EFNA1P20827 205 aaPredicted RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 NTSP30990 170 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 SRD5A2P31213 254 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 DNAJA1P31689 397 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 EVI2BP34910 448 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 LHX2P50458 406 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 MANFP55145 182 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 VSNL1P62760 191 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 IFFO1Q0D2I5 559 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 HSPB3Q12988 150 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 DECR1Q16698 335 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 ZNF385BQ569K4 471 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 AAGABQ6PD74 315 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 ZCCHC23Q6ZST2 131 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 GALNT10Q86SR1 603 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 LUZP2Q86TE4 346 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 MARCH3Q86UD3 253 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 EXOC3L1Q86VI1 746 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 DDIASQ8IXT1 998 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 UBQLNLQ8IYU4 475 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 CNPY4Q8N129 248 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 BANPQ8N9N5 519 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 NUP43Q8NFH3 380 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 MBD3L2Q8NHZ7 208 aaPredicted RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 AGR3Q8TD06 166 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 NUDT8Q8WV74 236 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 PIK3R3Q92569 461 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 ZBTB9Q96C00 473 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 INTS12Q96CB8 462 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 LRRC46Q96FV0 321 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 SFXN2Q96NB2 322 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 SH3GL2Q99962 352 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 GPATCH1Q9BRR8 931 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 POLDIP3Q9BY77 421 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 REEP4Q9H6H4 257 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 PPCSQ9HAB8 311 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 PPP4R1LQ9P1A2 415 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 MID2Q9UJV3 735 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 WBP11Q9Y2W2 641 aaKnown RBP8.7□□□□□ -1.02
MSH5-218ENST00000494646 TRAF6Q9Y4K3 522 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 ABCA4P78363 2273 aa8.7□□□□□ -1.02
MSH5-218ENST00000494646 H0YC42 278 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 PDPK1O15530 556 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 RCBTB2O95199 551 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 SLU7O95391 586 aaKnown RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 IL33O95760 270 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 TGM6O95932 706 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 CHEK2O96017 543 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 IGKV1D-16P01601 117 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 PRPS2P11908 318 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 SDC1P18827 310 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 PRPH2P23942 346 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 OPRM1P35372 400 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 TPD52P55327 224 aaPredicted RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 DSCR4P56555 118 aaPredicted RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 CLDN18P56856 261 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 RPL38P63173 70 aaKnown RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 MRPS22P82650 360 aaKnown RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 TESK1Q15569 626 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 ZNHIT3Q15649 155 aaPredicted RBP8.69□□□□□ -1.02
MSH5-218ENST00000494646 CYP27C1Q4G0S4 372 aa8.69□□□□□ -1.02
MSH5-218ENST00000494646 ARL13AQ5H913 290 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms