RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SONP18583 2426 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 DEFB108AA8MXU0 73 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 TRIM49D1C9J1S8 452 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 MANBAO00462 879 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 SIAH2O43255 324 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 TSPAN2O60636 221 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 COQ9O75208 318 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 JUNP05412 331 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 CRHP06850 196 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 RPS17P08708 135 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 CT45A8P0DMV1 189 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 CT45A9P0DMV2 189 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 TAC1P20366 129 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 CRYGSP22914 178 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 MPIP34949 423 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 NCBP2P52298 156 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBR4-216ENST00000494503 CTBP2P56545 445 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 TRA2BP62995 288 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 GUCY2DQ02846 1103 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 HEPACAMQ14CZ8 416 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 ZNHIT3Q15649 155 aaPredicted RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 CT45A2Q5DJT8 189 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 UBAP2Q5T6F2 1119 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 TMEM107Q6UX40 140 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 C20orf204Q6ZNR8 217 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 ADGRE4PQ86SQ3 457 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 SAMD14Q8IZD0 417 aaPredicted RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 LRRC75A-AS1Q8N1F1 130 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 METTL6Q8TCB7 284 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 ZNF675Q8TD23 568 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 ZNF483Q8TF39 744 aaPredicted RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 TMEM171Q8WVE6 324 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 GFM2Q969S9 779 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 CTHRC1Q96CG8 243 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 ARSGQ96EG1 525 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 VSTM2LQ96N03 204 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 HS3ST6Q96QI5 342 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 PAFAH2Q99487 392 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 PIP5K1AQ99755 562 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 MRPL57Q9BQC6 102 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 LRRC1Q9BTT6 524 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 TBL1XR1Q9BZK7 514 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 MRPL46Q9H2W6 279 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 ACSS3Q9H6R3 686 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 SLC35C2Q9NQQ7 365 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 DDX18Q9NVP1 670 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 ELOVL5Q9NYP7 299 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 TRPS1Q9UHF7 1281 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
UBR4-216ENST00000494503 MCM8Q9UJA3 840 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 CLEC4AQ9UMR7 237 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 NFU1Q9UMS0 254 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 EMC9Q9Y3B6 208 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 ZNF337Q9Y3M9 751 aa8.69□□□□□ -1.02
UBR4-216ENST00000494503 A8MT66 165 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 SHISA8B8ZZ34 492 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 HCRTR2O43614 444 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 NDUFB5O43674 189 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 ZIC3O60481 467 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 ULK1O75385 1050 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CRCPO75575 148 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CNOT4O95628 575 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 FCGR2AP12318 317 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 NID1P14543 1247 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CHN1P15882 459 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 NTSP30990 170 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CCKARP32238 428 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 KIR2DL2P43627 348 aaPredicted RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 PTH2RP49190 550 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 SERPINB9P50453 376 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 SUCLG1P53597 346 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 PNLIPRP2P54317 469 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 NR1H2P55055 460 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CLDN15P56746 228 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CLDN20P56880 219 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 PSPHP78330 225 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CLCQ05315 142 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CSTF3Q12996 717 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 FGFBP1Q14512 234 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 GANABQ14697 944 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 RASA2Q15283 850 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 DECR1Q16698 335 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 IMPG1Q17R60 797 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 SPIN4Q56A73 249 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 SYT10Q6XYQ8 523 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 GPRIN3Q6ZVF9 776 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 PLEKHM3Q6ZWE6 761 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 MARCH3Q86UD3 253 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 WFDC8Q8IUA0 241 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 ZNF610Q8N9Z0 462 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 OR2M3Q8NG83 312 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 OR7G2Q8NG99 324 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 IFT81Q8WYA0 676 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 SLC9A6Q92581 669 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms