RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ANKRD49Q8WVL7 239 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 DNAJA4Q8WW22 397 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 YIPF6Q96EC8 236 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 MOCOSQ96EN8 888 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 IMMP1LQ96LU5 166 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 CITED4Q96RK1 184 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 NODALQ96S42 347 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 NPAS2Q99743 824 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 VN1R1Q9GZP7 353 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 AICDAQ9GZX7 198 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 NARFLQ9H6Q4 476 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 PAQR5Q9NXK6 330 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 GLTPQ9NZD2 209 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 EMC3Q9P0I2 261 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 HCN3Q9P1Z3 774 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 KLHL42Q9P2K6 505 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TEKT2Q9UIF3 430 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 OSGIN1Q9UJX0 560 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 NXT1Q9UKK6 140 aaKnown RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TRAPPC4Q9Y296 219 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 NDUFAF1Q9Y375 327 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TPRKBQ9Y3C4 175 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF175Q9Y473 711 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 PSAT1Q9Y617 370 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 AUP1Q9Y679 476 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 HSPE1-MOB4S4R3N1 261 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 LOC102723996A0A087X1L8 192 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 A0A1W2PRG6 482 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF860A6NHJ4 632 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TUBAL3A6NHL2 446 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 C4orf51C9J302 202 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 CTDSP2O14595 271 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 EI24O14681 340 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZNHIT1O43257 154 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TBX1O43435 398 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 NPHS1O60500 1241 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF780AO75290 641 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PIAS1O75925 651 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PDE9AO76083 593 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 HEXBP07686 556 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 THRBP10828 461 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SPRP35270 261 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 DCTP40126 519 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 MAGEA12P43365 314 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TSFMP43897 325 aaKnown RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TDGF1P3P51864 188 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 KCNK10P57789 538 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PMP22Q01453 160 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 RUNX1T1Q06455 604 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SLC13A2Q13183 592 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 NAE1Q13564 534 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 DAG1Q14118 895 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF169Q14929 603 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TAB1Q15750 504 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 C18orf21Q32NC0 220 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TOR2AQ5JU69 321 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 C6orf141Q5SZD1 244 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 LIPMQ5VYY2 423 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF324BQ6AW86 544 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 C8orf82Q6P1X6 216 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 AGTRAPQ6RW13 159 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 NDUFAF7Q7L592 441 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PAGE2Q7Z2X7 111 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 EPHX4Q8IUS5 362 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 METTL4Q8N3J2 472 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 CADM2Q8N3J6 435 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 RAB42Q8N4Z0 105 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 OR5T3Q8NGG3 340 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 OR1N1Q8NGS0 311 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 CANT1Q8WVQ1 401 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 RPL3LQ92901 407 aaKnown RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PYCR2Q96C36 320 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TM4SF19Q96DZ7 209 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZHX1-C8orf76Q96EF9 292 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 LINGO1Q96FE5 620 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 FBXL20Q96IG2 436 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ST6GAL2Q96JF0 529 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 MAGEB10Q96LZ2 347 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 OPALINQ96PE5 141 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 OR4K3Q96R72 315 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 OR52B2Q96RD2 323 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SECISBP2Q96T21 854 aaKnown RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 CPNE1Q99829 537 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SGPP1Q9BX95 441 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 RBCK1Q9BYM8 510 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SLC29A3Q9BZD2 475 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SLIRPQ9GZT3 109 aaKnown RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 NXF2Q9GZY0 626 aaKnown RBP7.62□□□□□ -1.19
HDAC6-234ENST00000493923 NUAK2Q9H093 628 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF700Q9H0M5 742 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 ING3Q9NXR8 418 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 NSMCE4AQ9NXX6 385 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 SCN3BQ9NY72 215 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 TAS2R9Q9NYW1 312 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 USE1Q9NZ43 259 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PTTG3PQ9NZH4 202 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 MKL2Q9ULH7 1088 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 OSGIN2Q9Y236 505 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 CACNA1CQ13936 2221 aa7.62□□□□□ -1.19
HDAC6-234ENST00000493923 PDZD2O15018 2839 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms