RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR8G3PP0DMU2 310 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CNR1P21554 472 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 NOS3P29474 1203 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CDC42P60953 191 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CLN3Q13286 438 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF239Q16600 458 aaKnown RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PLEKHN1Q494U1 663 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SPIN4Q56A73 249 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF385CQ66K41 422 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM71Q6P5X7 295 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CASP12Q6UXS9 341 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 S100A7AQ86SG5 101 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 LAPTM4BQ86VI4 370 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TPRA1Q86W33 373 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 NPAS3Q8IXF0 933 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SLC35F3Q8IY50 421 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 ARMC10Q8N2F6 343 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PRSS35Q8N3Z0 413 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 WDTC1Q8N5D0 677 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 OR2G2Q8NGZ5 317 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 ARNTL2Q8WYA1 636 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 ACOT12Q8WYK0 555 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 NTAN1Q96AB6 310 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 VPS25Q9BRG1 176 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PRR14Q9BWN1 585 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 RNF32Q9H0A6 362 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 OR10A4Q9H209 315 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SLC25A32Q9H2D1 315 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM185BQ9H7F4 350 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TXNL4BQ9NX01 149 aaKnown RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 NTMQ9P121 344 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CHTOPQ9Y3Y2 248 aaKnown RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 DNAJC15Q9Y5T4 150 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 FAM86C2PA6NEL3 165 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 M0R036 132 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PRRG1O14668 218 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 DLEU1O43261 78 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 MT-ND4P03905 459 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CD3GP09693 182 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 LCP1P13796 627 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 HIST1H1BP16401 226 aaKnown RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 ACHEP22303 614 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CYP2F1P24903 491 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 MAGEA3P43357 314 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PRKXP51817 358 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TAS2R39P59534 338 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TGIF1Q15583 401 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 BATFQ16520 125 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 COQ5Q5HYK3 327 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TSTD2Q5T7W7 516 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SYPL2Q5VXT5 272 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TDRD10Q5VZ19 366 aaKnown RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PLBD1Q6P4A8 553 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 THOC6Q86W42 341 aaKnown RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 THNSL2Q86YJ6 484 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TRAPPC5Q8IUR0 188 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 KIAA0319LQ8IZA0 1049 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 MAML2Q8IZL2 1156 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PGBD5Q8N414 524 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 CLDN22Q8N7P3 220 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 OR9A1PQ8NGU1 263 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 OR52J3Q8NH60 311 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PYURFQ96I23 114 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 OR2M4Q96R27 311 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 DMRTA2Q96SC8 542 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 GPR22Q99680 433 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 NAA11Q9BSU3 229 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SARGQ9BW04 601 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 PRKD2Q9BZL6 878 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 TLNRD1Q9H1K6 362 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 HHATLQ9HCP6 504 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SEMA4BQ9NPR2 832 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-205ENST00000493587 SHROOM3Q8TF72 1996 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 hCG_1809904A0A1W2PP81 198 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 A0A1W2PR64 198 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 A0A1W2PRV1 198 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF705GA8MUZ8 300 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-205ENST00000493587 SGK494L7N484 410 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 RNF13O43567 381 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 MATN4O95460 622 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 IFNA2P01563 188 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 IFNA17P01571 189 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 HPXP02790 462 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 FABP3P05413 133 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 ARF4P18085 180 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-205ENST00000493587 MSX1P28360 303 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 AKT1P31749 480 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 CNTN1Q12860 1018 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 SERINC3Q13530 473 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 RNASE10Q5GAN6 216 aaKnown RBP6.46□□□□□ -1.37
VPS13B-205ENST00000493587 CST9Q5W186 159 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 MTFR2Q6P444 385 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 FIGNL1Q6PIW4 674 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 SMIM15Q7Z3B0 74 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 NAXDQ8IW45 347 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 FAM181AQ8N9Y4 354 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 OR4C6Q8NH72 309 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 SPATA13Q96N96 652 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms