RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 PDSS1Q5T2R2 415 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 OR5M10Q6IEU7 315 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 COMMD6Q7Z4G1 85 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 LMNTD1Q8N9Z9 388 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 BBS1Q8NFJ9 593 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 OR4D9Q8NGE8 314 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 OR1S1Q8NH92 325 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 TBX5Q99593 518 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 FUZQ9BT04 418 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 FNDC11Q9BVV2 318 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 OR51B5Q9H339 312 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF768Q9H5H4 540 aaKnown RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 IL20RAQ9UHF4 553 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 HELZP42694 1942 aaKnown RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 FAM170BA6NMN3 283 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 ARHGEF33A8MVX0 844 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 PRSS44E7EML9 344 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 F8W036 122 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 H0YIV9 168 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 RNF13O43567 381 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SLC28A2O43868 658 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 CLDN11O75508 207 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 CCND3P30281 292 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 MTNR1BP49286 362 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 TLE2Q04725 743 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 TUSC3Q13454 348 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 TSTA3Q13630 321 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 HTR4Q13639 388 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 TMEM255AQ5JRV8 349 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SLC27A4Q6P1M0 643 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SYT9Q86SS6 491 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 OR11G2Q8NGC1 345 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 OR51Q1Q8NH59 317 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 GCDHQ92947 438 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SPATA5L1Q9BVQ7 753 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SLC6A16Q9GZN6 736 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 WDR26Q9H7D7 661 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 AUNIPQ9H7T9 357 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 POLMQ9NP87 494 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-210ENST00000493582 GKN1Q9NS71 199 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 ASB6Q9NWX5 421 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 NTMQ9P121 344 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 SEC14L3Q9UDX4 400 aa10.99□□□□□ -0.65
HDAC4-210ENST00000493582 BRCA2P51587 3418 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ANHXE9PGG2 379 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GFYI3L273 518 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 RGS9O75916 674 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 KLKB1P03952 638 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 C4BPBP20851 252 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SPAM1P38567 509 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GPR33Q49SQ1 333 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SPOUT1Q5T280 376 aaKnown RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SMARCD3Q6STE5 483 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SEZ6L2Q6UXD5 910 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 NHLRC1Q6VVB1 395 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 PM20D2Q8IYS1 436 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SCARB1Q8WTV0 552 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 BCL7CQ8WUZ0 217 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ORAI3Q9BRQ5 295 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 TEX10Q9NXF1 929 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 CNIH4Q9P003 139 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 IRGMA1A4Y4 181 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 PRR23D1E9PI22 279 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ABCD4O14678 606 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 CHST10O43529 356 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SDC3O75056 442 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GLAP06280 429 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ADRB1P08588 477 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 PRR23D2P0DMB1 279 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 HOXB1P14653 301 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 RAD52P43351 418 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 MAPK9P45984 424 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 OC90Q02509 493 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SLC30A6Q6NXT4 461 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF322Q6U7Q0 402 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 PRICKLE2Q7Z3G6 844 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 TRMT11Q7Z4G4 463 aaKnown RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 IFNL1Q8IU54 200 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GPRC5AQ8NFJ5 357 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 TEX47Q8TBZ9 253 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF354BQ96LW1 612 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 TINF2Q9BSI4 451 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 DDX31Q9H8H2 851 aaKnown RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 BRF2Q9HAW0 419 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 A0A1W2PPK0 400 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 AGAP14A8MT82 685 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 D6RAR5 112 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 SUSD5O60279 629 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GJB5O95377 273 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 KLK1P06870 262 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GAAP10253 952 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ACP5P13686 325 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 KCNJ5P48544 419 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ERVK-25P63136 954 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 LYPLAL1Q5VWZ2 237 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 GRHL2Q6ISB3 625 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms