RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SUSD2Q9UGT4 822 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 PNMA8BQ9ULN7 279 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 CLCA2Q9UQC9 943 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 CEPT1Q9Y6K0 416 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 DSPPQ9NZW4 1301 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 EFCAB10A6NFE3 127 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 SNTNA6NMZ2 147 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RHPN2P1A8MT19 583 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 C4orf51C9J302 202 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 PPM1DO15297 605 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RGS10O43665 173 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 TRMUO75648 421 aaKnown RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DIRAS1O95057 198 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 CLIC3O95833 236 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DBIP07108 87 aaKnown RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 GNSP15586 552 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 NELFEP18615 380 aaKnown RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 CBLP22681 906 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DCKP27707 260 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ALDH4A1P30038 563 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 PIGAP37287 484 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 MC3RP41968 323 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ARRB1P49407 418 aaPredicted RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 MAN2A2P49641 1150 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RGS19P49795 217 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 PSMD4P55036 377 aaKnown RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ALDH6A1Q02252 535 aaKnown RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ILKQ13418 452 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 LSAMPQ13449 338 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RAPSNQ13702 412 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RUNX2Q13950 521 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 GPR19Q15760 415 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 MEP1AQ16819 746 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DUSP7Q16829 419 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 TMEM44Q2T9K0 475 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 INAVAQ3KP66 663 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ARHGAP11BQ3KRB8 267 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 C14orf28Q4W4Y0 310 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF311Q5JNZ3 666 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 FGD3Q5JSP0 725 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 TCTN3Q6NUS6 607 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 MED25Q71SY5 747 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RRM2BQ7LG56 351 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 PRSS48Q7RTY5 328 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 PLXDC1Q8IUK5 500 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DNAJC22Q8N4W6 341 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 OR9A2Q8NGT5 310 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 C9orf43Q8TAL5 461 aaPredicted RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 RORBQ92753 470 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 MVB12AQ96EY5 273 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF285Q96NJ3 590 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DOK1Q99704 481 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 MACROD1Q9BQ69 325 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 TPSD1Q9BZJ3 242 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 TCEAL2Q9H3H9 227 aaPredicted RBP9.36□□□□□ -0.91
PRPF3-206ENST00000493553 PDE7BQ9NP56 450 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 C14orf105Q9NVL8 296 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 CLN6Q9NWW5 311 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 CDC14AQ9UNH5 594 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 DOCK9Q9BZ29 2069 aa9.36□□□□□ -0.91
PRPF3-206ENST00000493553 LOC105369274A0A096LPK9 316 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 LOC102723532A0A0G2JNH3 316 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 IRGMA1A4Y4 181 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 H0YIG0 161 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 M0R3G1 203 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CYR61O00622 381 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 AP3D1O14617 1153 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 BCAT2O15382 392 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 YKT6O15498 198 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 P2RX6O15547 441 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF749O43361 778 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 NUDT21O43809 227 aaKnown RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OR10H2O60403 315 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 FMO6PO60774 539 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 B4GALT2O60909 372 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CTNSO60931 367 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 MITFO75030 526 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 STX11O75558 287 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 SEC14L2O76054 403 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OR5F1O95221 314 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 NSA2O95478 260 aaKnown RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 ZBTB11O95625 1053 aaPredicted RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 C1QCP02747 245 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OSMP13725 252 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 PAX7P23759 505 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OR1E2P47887 323 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CLK3P49761 638 aaKnown RBP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CASP9P55211 416 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 CDH15P55291 814 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 HSD17B7P56937 341 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 OLR1P78380 273 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 TFF2Q03403 129 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 ST3GAL3Q11203 375 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 MAP4K2Q12851 820 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 C1orf61Q13536 156 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 SERTAD2Q14140 314 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 PUM1Q14671 1186 aaKnown RBP eCLIP9.35□□□□□ -0.91
PRPF3-206ENST00000493553 GRM7Q14831 915 aa9.35□□□□□ -0.91
PRPF3-206ENST00000493553 TRAM2Q15035 370 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms