RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 GIFP27352 417 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CERS1P27544 350 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 APOBEC3AP31941 199 aaPredicted RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 CXCR5P32302 372 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 PTGDSP41222 190 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 KCNJ1P48048 391 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 FNTAP49354 379 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 VPS41P49754 854 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 PLA2G16P53816 162 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 AP1S2P56377 157 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ARL4CP56559 192 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CLDN20P56880 219 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 B3GALT5-AS1P59052 145 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 STXBP1P61764 594 aaKnown RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 SNRPD2P62316 118 aaKnown RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 GUCA2AQ02747 115 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 SP140Q13342 867 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ITGADQ13349 1161 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ZNF267Q14586 743 aaPredicted RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 MLC1Q15049 377 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 RBBP5Q15291 538 aaKnown RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 TAF9Q16594 264 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.72□□□□□ -1.65
SEC13-219ENST00000492602 SPANXN3Q5MJ09 141 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 SWT1Q5T5J6 900 aaKnown RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 RAET1LQ5VY80 246 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ANKRD22Q5VYY1 191 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 HLA-DQA1Q5Y7H0 255 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 OR5M10Q6IEU7 315 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 MFSD12Q6NUT3 480 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ZNF549Q6P9A3 640 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 AGTRAPQ6RW13 159 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 SPATC1Q76KD6 591 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 SLC46A3Q7Z3Q1 461 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 EXOC3L1Q86VI1 746 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 LRRC8AQ8IWT6 810 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CCDC116Q8IYX3 515 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 AGGF1Q8N302 714 aaeCLIP4.72□□□□□ -1.65
SEC13-219ENST00000492602 NKAPQ8N5F7 415 aaKnown RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 PRELID2Q8N945 189 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 TTLQ8NG68 377 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 OR51F2Q8NH61 342 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 LPGAT1Q92604 370 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CDKL2Q92772 493 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 GAL3ST3Q96A11 431 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ZNF669Q96BR6 464 aaPredicted RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 LRRC39Q96DD0 335 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 SNF8Q96H20 258 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 NODALQ96S42 347 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CENPKQ9BS16 269 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 KCNF1Q9H3M0 494 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 NARFLQ9H6Q4 476 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CNOT10Q9H9A5 744 aaKnown RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 BEX1Q9HBH7 125 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 MYNNQ9NPC7 610 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 TREX1Q9NSU2 369 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 AURKAIP1Q9NWT8 199 aaPredicted RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 SLC17A6Q9P2U8 582 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 RNF14Q9UBS8 474 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ADAMTS6Q9UKP5 1117 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 FBXO5Q9UKT4 447 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 CORO1CQ9ULV4 474 aaPredicted RBP4.72□□□□□ -1.65
SEC13-219ENST00000492602 PPP2R2CQ9Y2T4 447 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 VWA7Q9Y334 891 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 ZNF337Q9Y3M9 751 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 DYRK1BQ9Y463 629 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 PCDHB14Q9Y5E9 798 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 KCNE2Q9Y6J6 123 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 EXPH5Q8NEV8 1989 aa4.72□□□□□ -1.65
SEC13-219ENST00000492602 TRAV20A0A0B4J274 112 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 GOLGA8QA0A0J9YX86 632 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 A0A1B0GUS0 222 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 GOLGA8OA6NCC3 632 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 GOLGA6L10A6NI86 522 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 OR6C76A6NM76 312 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 GOLGA8NF8WBI6 632 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 GOLGA8RI6L899 631 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 FGF17O60258 216 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 LYZL6O75951 148 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 PPP1R3DO95685 299 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 TUBBP07437 444 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 ENO2P09104 434 aaPredicted RBP4.71□□□□□ -1.66
SEC13-219ENST00000492602 PGAM1P18669 254 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 PTAFRP25105 342 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 CD40P25942 277 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 CNTFP26441 200 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 ABCD3P28288 659 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 AGTR1P30556 359 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 EIF1AXP47813 144 aaKnown RBP4.71□□□□□ -1.66
SEC13-219ENST00000492602 HNMTP50135 292 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 ZNF83P51522 516 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 KRTAP10-3P60369 221 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 POU4F1Q01851 419 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 ZP4Q12836 540 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 CALCOCO2Q13137 446 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 BIKQ13323 160 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 CTBP1Q13363 440 aa4.71□□□□□ -1.66
SEC13-219ENST00000492602 SNTA1Q13424 505 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms