RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 LIMS4P0CW20 117 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
VPS8-225ENST00000492449 TNFRSF1BP20333 461 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 PSMB1P20618 241 aaKnown RBP9.13□□□□□ -0.95
VPS8-225ENST00000492449 AKAP5P24588 427 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 TACR1P25103 407 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 PMELP40967 661 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 PDZK1IP1Q13113 114 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 EIF4EBP2Q13542 120 aaPredicted RBP9.13□□□□□ -0.95
VPS8-225ENST00000492449 KRT33BQ14525 404 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 LBHQ53QV2 105 aaPredicted RBP9.13□□□□□ -0.95
VPS8-225ENST00000492449 RAB41Q5JT25 222 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 EOGTQ5NDL2 527 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 CTSL3PQ5NE16 218 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 GPRC6AQ5T6X5 926 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 PAQR9Q6ZVX9 377 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 BHLHA9Q7RTU4 235 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 SAMD12Q8N8I0 201 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 NR4A3Q92570 626 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 FUBP3Q96I24 572 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS8-225ENST00000492449 WDR77Q9BQA1 342 aaPredicted RBP9.13□□□□□ -0.95
VPS8-225ENST00000492449 ULBP1Q9BZM6 244 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 CRTAC1Q9NQ79 661 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 AFF4Q9UHB7 1163 aaKnown RBP9.13□□□□□ -0.95
VPS8-225ENST00000492449 KLF15Q9UIH9 416 aa9.13□□□□□ -0.95
VPS8-225ENST00000492449 THSD7AQ9UPZ6 1657 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 MCIDASD6RGH6 385 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 LRRN3E7EW58 273 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CHST10O43529 356 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 TGM5O43548 720 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 NDUFS3O75489 264 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 IGF2P01344 180 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ZNF8P17098 575 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 FEN1P39748 380 aaKnown RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 OR1E2P47887 323 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CXADRP78310 365 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 RNF4P78317 190 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 PTPRNQ16849 979 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CRB2Q5IJ48 1285 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 FAM111BQ6SJ93 734 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 SSX9Q7RTT3 188 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 NAA40Q86UY6 237 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 B3GALNT2Q8NCR0 500 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ARRDC2Q8TBH0 407 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CD99L2Q8TCZ2 262 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 TSSK3Q96PN8 268 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 TRIB3Q96RU7 358 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CHRDQ9H2X0 955 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 LRRN3Q9H3W5 708 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CTPS2Q9NRF8 586 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 WBP1LQ9NX94 342 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ELOVL2Q9NXB9 296 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 FLRT1Q9NZU1 646 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 DHCR7Q9UBM7 475 aaKnown RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 DOCK4Q8N1I0 1966 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 NUDT19A8MXV4 375 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 WASH3PC4AMC7 463 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ICOSLGO75144 302 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 RECQL4O94761 1208 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CD3GP09693 182 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 AGAP20933 346 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 HTR5AP47898 357 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 DGCR2P98153 550 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CAP1Q01518 475 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 IL10RAQ13651 578 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 BOP1Q14137 746 aaKnown RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 PRAMEF18Q5VWM3 479 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ARMCX2Q7L311 632 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 BCDIN3DQ7Z5W3 292 aaKnown RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 DNAJB7Q7Z6W7 309 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 LHFPL3Q86UP9 236 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 HDDC3Q8N4P3 179 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 PPP1R16BQ96T49 567 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 GMLQ99445 158 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 COPS8Q99627 209 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 PBX4Q9BYU1 374 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 GPN1Q9HCN4 374 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 ZNF629Q9UEG4 869 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 OARD1Q9Y530 152 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 BRWD3Q6RI45 1802 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 C1orf196B1AJZ1 125 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 BLOC1S5-TXNDC5H3BN57 136 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CREBL2O60519 120 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 RGS9O75916 674 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 KRT33AO76009 404 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 IGLV3-25P01717 112 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 PRSS56P0CW18 603 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ABOP16442 354 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 MVDP53602 400 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 BDH1Q02338 343 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 SREBF2Q12772 1141 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 ARMC12Q5T9G4 340 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 C9orf57Q5W0N0 161 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms