RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 IL33O95760 270 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 ACTL6AO96019 429 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 PRF1P14222 555 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 GRK2P25098 689 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 SRD5A2P31213 254 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 KIR3DL1P43629 444 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 CLK3P49761 638 aaKnown RBP13.74□□□□□ -0.21
USP39-217ENST00000491659 PRKAG1P54619 331 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
USP39-217ENST00000491659 PRR5P85299 388 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 GAB1Q13480 694 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 PTGR1Q14914 329 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 ACSF3Q4G176 576 aaPredicted RBP13.74□□□□□ -0.21
USP39-217ENST00000491659 C6orf136Q5SQH8 315 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 IL23RQ5VWK5 629 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 MEX3BQ6ZN04 569 aaKnown RBP13.74□□□□□ -0.21
USP39-217ENST00000491659 IFNEQ86WN2 208 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 LACC1Q8IV20 430 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 KIRREL3Q8IZU9 778 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 CDRT4Q8N9R6 151 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 OR4K17Q8NGC6 315 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 GPR151Q8TDV0 419 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 RNF138Q8WVD3 245 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 UCK2Q9BZX2 261 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 ATAD3AQ9NVI7 634 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 Q9UFV3 132 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
USP39-217ENST00000491659 ITPR2Q14571 2701 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 HSPB2A8KAH6 182 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 EMC8O43402 210 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 ITM2AO43736 263 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 DHRS4L1P0CG22 281 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 GABRA3P34903 492 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 ADH7P40394 386 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 RCAN2Q14206 197 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 MLC1Q15049 377 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 HSPB2Q16082 182 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 PDCD2Q16342 344 aaPredicted RBP13.73□□□□□ -0.21
USP39-217ENST00000491659 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 DCST1Q5T197 706 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 CPTPQ5TA50 214 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 ENPP6Q6UWR7 440 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 NATD1Q8N6N6 113 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 ZNF781Q8N8C0 355 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 OR7A2PQ8NGA2 310 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 SLC9A6Q92581 669 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 ZBTB9Q96C00 473 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 RMND5BQ96G75 393 aaPredicted RBP13.73□□□□□ -0.21
USP39-217ENST00000491659 PRPF18Q99633 342 aaKnown RBP13.73□□□□□ -0.21
USP39-217ENST00000491659 ENKD1Q9H0I2 346 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 SDHAF3Q9NRP4 125 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 FAM120CQ9NX05 1096 aaKnown RBP13.73□□□□□ -0.21
USP39-217ENST00000491659 TAS2R10Q9NYW0 307 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 FBXL2Q9UKC9 423 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
USP39-217ENST00000491659 H0Y3Z8 333 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 TOXO94900 526 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 NKX2-2O95096 273 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 EPPINO95925 133 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 EFNA1P20827 205 aaPredicted RBP13.72□□□□□ -0.21
USP39-217ENST00000491659 PRPS1L1P21108 318 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 BGNP21810 368 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 MSX1P28360 303 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 SLC1A6P48664 564 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 PRIM2P49643 509 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 GAS1P54826 345 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 TFF3Q07654 80 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 STX5Q13190 355 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 SLC25A35Q3KQZ1 300 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 CES4AQ5XG92 561 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 OR5M10Q6IEU7 315 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 AAGABQ6PD74 315 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 FBXO30Q8TB52 745 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 PIK3R3Q92569 461 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 WDYHV1Q96HA8 205 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 SFXN2Q96NB2 322 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
USP39-217ENST00000491659 TBL1XR1Q9BZK7 514 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 TRIM8Q9BZR9 551 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
USP39-217ENST00000491659 NOP53Q9NZM5 478 aaKnown RBP13.72□□□□□ -0.21
USP39-217ENST00000491659 NTMQ9P121 344 aa13.72□□□□□ -0.21
USP39-217ENST00000491659 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
USP39-217ENST00000491659 NOTCH2Q04721 2471 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 A0A1W2PRB8 838 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 GXYLT2A0PJZ3 443 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 DVL2O14641 736 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 FADS1O60427 444 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 IL2RAP01589 272 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 ACP2P11117 423 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 LAMP1P11279 417 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 DPP4P27487 766 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 SSTR2P30874 369 aa13.71□□□□□ -0.21
USP39-217ENST00000491659 RPL14P50914 215 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms