RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 FNDC7Q5VTL7 733 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ANGPTL8Q6UXH0 198 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 C6orf120Q7Z4R8 191 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CLEC4FQ8N1N0 589 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FAM26EQ8N5C1 309 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 OR9I1Q8NGQ6 314 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 OR1J4Q8NGS1 313 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 GOT1L1Q8NHS2 421 aaPredicted RBP14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 RFWD2Q8NHY2 731 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ADAMTS15Q8TE58 950 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SLC35G5Q96KT7 338 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CCDC134Q9H6E4 229 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 QPCTLQ9NXS2 382 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 DCTN4Q9UJW0 460 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ABCG2Q9UNQ0 655 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 WIF1Q9Y5W5 379 aa14.89□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 A0A1B0GTH9 108 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CLEC18AA5D8T8 446 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 C2orf72A6NCS6 295 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 GNB5O14775 395 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SLC19A2O60779 497 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SOX30O94993 753 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 KCNK2O95069 426 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 UTS2O95399 124 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 IGKV1D-16P01601 117 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 IGHG3P01860 377 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CELA3AP09093 270 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ABOP16442 354 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 GDF1P27539 372 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ZFP36L2P47974 494 aaKnown RBP14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 POLR2JP52435 117 aaKnown RBP14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 IRX1P78414 480 aaPredicted RBP14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 POU6F2P78424 691 aaPredicted RBP14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SRSF1Q07955 248 aaKnown RBP eCLIP14.88□□□□□ -0.039e-9■■■■□ 19.7
MSH5-SAPCD1-206ENST00000491552 SLC10A1Q14973 349 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TIGD3Q6B0B8 471 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ARHGAP11AQ6P4F7 1023 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FIGNL1Q6PIW4 674 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CLEC18BQ6UXF7 455 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SPPL2CQ8IUH8 684 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CHERPQ8IWX8 916 aaKnown RBP14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TRIML2Q8N7C3 387 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CLEC18CQ8NCF0 446 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FAM110BQ8TC76 370 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CDS1Q92903 461 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 GNRHR2Q96P88 292 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 OR7D2Q96RA2 312 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 PANX1Q96RD7 426 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 BTBD2Q9BX70 525 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FGFR1OP2Q9NVK5 253 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FLRT3Q9NZU0 649 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SLC5A6Q9Y289 635 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ZNF835Q9Y2P0 537 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 C15orf41Q9Y2V0 281 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 LIPGQ9Y5X9 500 aa14.88□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 UBR5O95071 2799 aaPredicted RBP14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TRGV8A0A0C4DH27 118 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FAM234BA2RU67 622 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SEMA7AO75326 666 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 VIMP08670 466 aaKnown RBP14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TROVE2P10155 538 aaKnown RBP eCLIP14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 MATN1P21941 496 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 PTPN6P29350 595 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CHI3L1P36222 383 aaPredicted RBP14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 MAN2A2P49641 1150 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ATP4BP51164 291 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CASP6P55212 293 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 RPS26P62854 115 aaKnown RBP14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SQLEQ14534 574 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TIGD2Q4W5G0 525 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 C4orf17Q53FE4 359 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 C1QL3Q5VWW1 255 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SAXO2Q658L1 398 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 Q6ZPB1 254 aaPredicted RBP14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 MSANTD1Q6ZTZ1 278 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TRILQ7L0X0 811 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FGD2Q7Z6J4 655 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 GALNT10Q86SR1 603 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 OR5D16Q8NGK9 328 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SLC35A5Q9BS91 424 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 INPP5KQ9BT40 448 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 G6PC3Q9BUM1 346 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 UBQLN3Q9H347 655 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SERHL2Q9H4I8 314 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 LDAHQ9H6V9 325 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 RMND5AQ9H871 391 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 PCDHGB3Q9Y5G1 929 aa14.87□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FASNP49327 2511 aaKnown RBP14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 TRGV5A0A0B4J1U4 118 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 A0A0G2JND7 137 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 A0A1B0GUH1 482 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 A0A1B0GVC2 190 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 CCDC154A6NI56 674 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 DYNC1I1O14576 645 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 RFXANKO14593 260 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 ZNHIT1O43257 154 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SCO2O43819 266 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 SUSD5O60279 629 aa14.86□□□□□ -0.03
MSH5-SAPCD1-206ENST00000491552 FADS1O60427 444 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms