RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GANABQ14697 944 aaKnown RBP15.08■□□□□ 0
PDLIM2-217ENST00000491330 TNFAIP8L3Q5GJ75 292 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 KANK2Q63ZY3 851 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 OR2A2Q6IF42 318 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 OR2L13Q8N349 312 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 MEIOBQ8N635 442 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 EFHD2Q96C19 240 aaPredicted RBP15.08■□□□□ 0
PDLIM2-217ENST00000491330 GLIPR2Q9H4G4 154 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 REEP4Q9H6H4 257 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 ATAD3AQ9NVI7 634 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 TRAF6Q9Y4K3 522 aa15.08■□□□□ 0
PDLIM2-217ENST00000491330 NCOA6Q14686 2063 aaPredicted RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 MBD3L4A6NDZ8 208 aaPredicted RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 MBD3L3A6NE82 208 aaPredicted RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 MBD3L5A6NJ08 208 aaPredicted RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 EEF1E1-BLOC1S5C9J1V9 151 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 EEF1E1O43324 174 aaKnown RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 HSPA4LO95757 839 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 BPGMP07738 259 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 LINC00032P0C843 101 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 TMIGD3P0DMS9 266 aaPredicted RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 EVI2BP34910 448 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 ETV4P43268 484 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 CPA2P48052 419 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 PRKAG1P54619 331 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 HSPB3Q12988 150 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 BCL2A1Q16548 175 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 GALNTL6Q49A17 601 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 CDRT4Q8N9R6 151 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 WDSUB1Q8N9V3 476 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 SIMC1Q8NDZ2 872 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 TNIP2Q8NFZ5 429 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 MBD3L2Q8NHZ7 208 aaPredicted RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 GPR151Q8TDV0 419 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 FAM222BQ8WU58 562 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 WNT2BQ93097 391 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 SFXN3Q9BWM7 321 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 ANKRA2Q9H9E1 313 aa15.07■□□□□ 0
PDLIM2-217ENST00000491330 FAM120CQ9NX05 1096 aaKnown RBP15.07■□□□□ 0
PDLIM2-217ENST00000491330 UPK1AO00322 258 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 SCO2O43819 266 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 TBX19O60806 448 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 GABRA3P34903 492 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 PRIM2P49643 509 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 RPS3AP61247 264 aaKnown RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 RPL38P63173 70 aaKnown RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 PSG6Q00889 435 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 C17orf67Q0P5P2 114 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 MAD2L1Q13257 205 aaPredicted RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 KIAA0040Q15053 153 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 ATP6AP1LQ52LC2 224 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 ARL13AQ5H913 290 aaPredicted RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 CEP85LQ5SZL2 805 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 RAET1LQ5VY80 246 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 ZCCHC12Q6PEW1 402 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 GRAMD2AQ8IUY3 354 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 LIX1LQ8IVB5 337 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 OR6Y1Q8NGX8 325 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.06■□□□□ 0
PDLIM2-217ENST00000491330 GFM2Q969S9 779 aaKnown RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 CHMP6Q96FZ7 201 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 FCRL1Q96LA6 429 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 TSSK3Q96PN8 268 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 PIGQQ9BRB3 760 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 PIGMQ9H3S5 423 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 ACSS1Q9NUB1 689 aaPredicted RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 DNAJB12Q9NXW2 375 aaKnown RBP15.06■□□□□ 0
PDLIM2-217ENST00000491330 SLC17A7Q9P2U7 560 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 CCL27Q9Y4X3 112 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 DNAJC15Q9Y5T4 150 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 PCNX1Q96RV3 2341 aa15.06■□□□□ 0
PDLIM2-217ENST00000491330 TUBAL3A6NHL2 446 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 CASKO14936 926 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 AKAP10O43572 662 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 SPAG7O75391 227 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 LYPLA1O75608 230 aaPredicted RBP15.05■□□□□ -0
PDLIM2-217ENST00000491330 IL33O95760 270 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 KRT16P08779 473 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 HK1P19367 917 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 POU3F2P20265 443 aaPredicted RBP15.05■□□□□ -0
PDLIM2-217ENST00000491330 LCN1P31025 176 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 PTGDSP41222 190 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 SERPINB4P48594 390 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 SLC18A1P54219 525 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 SMU1Q2TAY7 513 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 LSM12Q3MHD2 195 aaKnown RBP15.05■□□□□ -0
PDLIM2-217ENST00000491330 FBXL19-AS1Q494R0 122 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 OR5M10Q6IEU7 315 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 NPSR1Q6W5P4 371 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 EXOC3L1Q86VI1 746 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 NUDCD3Q8IVD9 361 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 NUP43Q8NFH3 380 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 TWIST2Q8WVJ9 160 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 SLC9A6Q92581 669 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 LMF2Q9BU23 707 aaKnown RBP15.05■□□□□ -0
PDLIM2-217ENST00000491330 G6PC3Q9BUM1 346 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 POLDIP3Q9BY77 421 aaKnown RBP15.05■□□□□ -0
PDLIM2-217ENST00000491330 EQTNQ9NQ60 294 aa15.05■□□□□ -0
PDLIM2-217ENST00000491330 EIF3LQ9Y262 564 aaKnown RBP15.05■□□□□ -0
PDLIM2-217ENST00000491330 RPH3AQ9Y2J0 694 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms