RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SNRNP27Q8WVK2 155 aaKnown RBP17.19■□□□□ 0.34
MCF2L-230ENST00000491028 MAL2Q969L2 176 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 TMBIM1Q969X1 311 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 OMA1Q96E52 524 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 SDF2Q99470 211 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF350Q9GZX5 532 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 MUC13Q9H3R2 512 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ABI3Q9P2A4 366 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 SUCOQ9UBS9 1254 aaKnown RBP17.19■□□□□ 0.34
MCF2L-230ENST00000491028 PACSIN3Q9UKS6 424 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 NPFFR2Q9Y5X5 522 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 DOCK10Q96BY6 2186 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 ABCB7O75027 752 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 PPM1BO75688 479 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 PDE5AO76074 875 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 IL33O95760 270 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 ATP6V1C1P21283 382 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 IL12BP29460 328 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 SSR4P51571 173 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 PNLIPRP2P54317 469 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 MAPK11Q15759 364 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 CCNJQ5T5M9 372 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 ABHD17BQ5VST6 288 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 AP1ARQ63HQ0 302 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 FCRLBQ6BAA4 426 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 FIGNL1Q6PIW4 674 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 C16orf47Q6ZP98 133 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-230ENST00000491028 PTRH1Q86Y79 214 aaKnown RBP17.18■□□□□ 0.34
MCF2L-230ENST00000491028 ANKFN1Q8N957 763 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 APOBEC4Q8WW27 367 aaKnown RBP17.18■□□□□ 0.34
MCF2L-230ENST00000491028 DIO2Q92813 273 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 PMM1Q92871 262 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 CPNE5Q9HCH3 593 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 BCL2L10Q9HD36 194 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 MAGEL2Q9UJ55 1249 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 USP22Q9UPT9 525 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 WDR45Q9Y484 360 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 DSPPQ9NZW4 1301 aa17.18■□□□□ 0.34
MCF2L-230ENST00000491028 A0A0G2JPF8 293 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 OR6C70A6NIJ9 312 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 HNRNPCL2B2RXH8 293 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 HNRNPCL3B7ZW38 293 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 GSTA4O15217 222 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 TSPAN2O60636 221 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 REM1O75628 298 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 CEACAM4O75871 244 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 DNAJB5O75953 348 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 PDE9AO76083 593 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 H6PDO95479 791 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 IGKV1D-16P01601 117 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 CHRM4P08173 479 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 FBXO45P0C2W1 286 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 HNRNPCL4P0DMR1 293 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 TCN1P20061 433 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-230ENST00000491028 EFR3AQ14156 821 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 AGAP7PQ5VUJ5 663 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 B3GNTL1Q67FW5 361 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-230ENST00000491028 LYPD8Q6UX82 237 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 FRRS1Q6ZNA5 592 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 HPS6Q86YV9 775 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 GPALPP1Q8IXQ4 340 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 PRR22Q8IZ63 422 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 OIT3Q8WWZ8 545 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 CLPTM1LQ96KA5 538 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 AGAP4Q96P64 663 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 LMF1Q96S06 567 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 SAP130Q9H0E3 1048 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 SLC38A1Q9H2H9 487 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 RUBCNLQ9H714 662 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 GPR83Q9NYM4 423 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 GMPR2Q9P2T1 348 aaKnown RBP17.17■□□□□ 0.34
MCF2L-230ENST00000491028 PCDHGA10Q9Y5H3 936 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 FRYQ5TBA9 3013 aa17.17■□□□□ 0.34
MCF2L-230ENST00000491028 URB1O60287 2271 aaKnown RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 HS6ST1O60243 411 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 KIAA0513O60268 411 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF354AO60765 605 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 GMNNO75496 209 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 PGM3O95394 542 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 GGT1P19440 569 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 CCL11P51671 97 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 PCBP3P57721 371 aaKnown RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 TRIM25Q14258 630 aaKnown RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 TYW3Q6IPR3 259 aaKnown RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 ISLR2Q6UXK2 745 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 CCDC80Q76M96 950 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 PATL1Q86TB9 770 aaKnown RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 KRT73Q86Y46 540 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF619Q8N2I2 560 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 TMEM156Q8N614 296 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 FAM156AQ8NDB6 213 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 ASB15Q8WXK1 588 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 EFHD2Q96C19 240 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 ASB9Q96DX5 294 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 SPACA9Q96E40 222 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 COL21A1Q96P44 957 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 TREX2Q9BQ50 279 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-230ENST00000491028 SNX13Q9Y5W8 968 aa17.16■□□□□ 0.34
MCF2L-230ENST00000491028 CXCR6O00574 342 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 MAN1A2O60476 641 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms