RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 EQTNQ9NQ60 294 aa28.51■■■□□ 2.15
LDB1-204ENST00000490751 DKKL1Q9UK85 242 aa28.51■■■□□ 2.15
LDB1-204ENST00000490751 CSMD2Q7Z408 3487 aa28.51■■■□□ 2.15
LDB1-204ENST00000490751 C17orf51A8MQB3 221 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 IL2RAP01589 272 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 ETV4P43268 484 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 ZNF844Q08AG5 666 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 XKR7Q5GH72 579 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 TRIM42Q8IWZ5 723 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 RELL2Q8NC24 303 aaPredicted RBP28.5■■■□□ 2.15
LDB1-204ENST00000490751 PPP3R2Q96LZ3 170 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 FLRT3Q9NZU0 649 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 PPP4R1LQ9P1A2 415 aa28.5■■■□□ 2.15
LDB1-204ENST00000490751 CD8B2A6NJW9 211 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 B4DXG7 233 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 DVL2O14641 736 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 PRPS2P11908 318 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 BMP5P22003 454 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 FRKP42685 505 aaPredicted RBP28.49■■■□□ 2.15
LDB1-204ENST00000490751 RFX3P48380 749 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 MANFP55145 182 aaKnown RBP28.49■■■□□ 2.15
LDB1-204ENST00000490751 GFRA1P56159 465 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 RCAN2Q14206 197 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 ENPP6Q6UWR7 440 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 OR4K17Q8NGC6 315 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 ZDHHC2Q9UIJ5 367 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 MRTO4Q9UKD2 239 aaKnown RBP28.49■■■□□ 2.15
LDB1-204ENST00000490751 ABCG2Q9UNQ0 655 aa28.49■■■□□ 2.15
LDB1-204ENST00000490751 TTC36A6NLP5 189 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 TMEM114B3SHH9 223 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 FADS1O60427 444 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 PEX11AO75192 247 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 SKAP2O75563 359 aaPredicted RBP28.48■■■□□ 2.15
LDB1-204ENST00000490751 IL33O95760 270 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 CPN1P15169 458 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 TCEA1P23193 301 aaKnown RBP28.48■■■□□ 2.15
LDB1-204ENST00000490751 GABRA3P34903 492 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 DLX5P56178 289 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 OR6Y1Q8NGX8 325 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 ZPLD1Q8TCW7 415 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 MTERF3Q96E29 417 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 SFXN2Q96NB2 322 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 C3orf14Q9HBI5 128 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 ACSS1Q9NUB1 689 aaPredicted RBP28.48■■■□□ 2.15
LDB1-204ENST00000490751 DOCK7Q96N67 2140 aa28.48■■■□□ 2.15
LDB1-204ENST00000490751 MBD3L4A6NDZ8 208 aaPredicted RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 MBD3L3A6NE82 208 aaPredicted RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 MBD3L5A6NJ08 208 aaPredicted RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 H0Y3Z8 333 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 RGS16O15492 202 aaPredicted RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 DPP4P27487 766 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 MAPK1P28482 360 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 ZNF136P52737 540 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 PRKAG1P54619 331 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 PSMD4P55036 377 aaKnown RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 SRYQ05066 204 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 SZRD1Q7Z422 152 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 R3HCC1LQ7Z5L2 792 aaKnown RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 MBD3L2Q8NHZ7 208 aaPredicted RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 PKNOX2Q96KN3 472 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 C3orf30Q96M34 536 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 TUBA1CQ9BQE3 449 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 CALHM2Q9HA72 323 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 FAM120CQ9NX05 1096 aaKnown RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 KCNN3Q9UGI6 736 aa28.47■■■□□ 2.15
LDB1-204ENST00000490751 MRPS18CQ9Y3D5 142 aaKnown RBP28.47■■■□□ 2.15
LDB1-204ENST00000490751 GXYLT2A0PJZ3 443 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 CTIFO43310 598 aaKnown RBP28.46■■■□□ 2.15
LDB1-204ENST00000490751 EFNA1P20827 205 aaPredicted RBP28.46■■■□□ 2.15
LDB1-204ENST00000490751 HPCAL1P37235 193 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 SERPINB4P48594 390 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 STARP49675 285 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 STX5Q13190 355 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 ATP6AP1LQ52LC2 224 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 AAGABQ6PD74 315 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 NUDCD3Q8IVD9 361 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 FADS6Q8N9I5 356 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 NUP43Q8NFH3 380 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 CEP70Q8NHQ1 597 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 GPR151Q8TDV0 419 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 PIK3R3Q92569 461 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 ZNF559Q9BR84 538 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 DSN1Q9H410 356 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 SLC24A3Q9HC58 644 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 ZNF629Q9UEG4 869 aaPredicted RBP28.46■■■□□ 2.15
LDB1-204ENST00000490751 ATP6V1HQ9UI12 483 aa28.46■■■□□ 2.15
LDB1-204ENST00000490751 RPH3AQ9Y2J0 694 aaPredicted RBP28.46■■■□□ 2.15
LDB1-204ENST00000490751 SCAMP2O15127 329 aaKnown RBP28.45■■■□□ 2.14
LDB1-204ENST00000490751 KCNH1O95259 989 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 LHX2P50458 406 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 DSCR4P56555 118 aaPredicted RBP28.45■■■□□ 2.14
LDB1-204ENST00000490751 MYBPHQ13203 477 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 POMZP3Q6PJE2 187 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 LRIG3Q6UXM1 1119 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 OR2M3Q8NG83 312 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 PPP1R14CQ8TAE6 165 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 HOXB13Q92826 284 aaPredicted RBP28.45■■■□□ 2.14
LDB1-204ENST00000490751 RMND5BQ96G75 393 aaPredicted RBP28.45■■■□□ 2.14
LDB1-204ENST00000490751 MS4A4EQ96PG1 132 aa28.45■■■□□ 2.14
LDB1-204ENST00000490751 C1orf50Q9BV19 199 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms