RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 RAP2CQ9Y3L5 183 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 NCKAP5O14513 1909 aa9.46□□□□□ -0.89
TTC28-207ENST00000490475 MPDZO75970 2070 aa9.46□□□□□ -0.89
TTC28-207ENST00000490475 GMNCA6NCL1 334 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 AKAP10O43572 662 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 CBR3O75828 277 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 LRATO95237 230 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 ABCB1P08183 1280 aaPredicted RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 DDCP20711 480 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 DRD5P21918 477 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 BMP5P22003 454 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 GPX3P22352 226 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 CHMP24386 653 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 DNASE1P24855 282 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 CTSSP25774 331 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 UQCRC1P31930 480 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 KRT20P35900 424 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 PPICP45877 212 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 TRPC1P48995 793 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 FBXW4P57775 412 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 RPL38P63173 70 aaKnown RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 MRPS22P82650 360 aaKnown RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 LTB4RQ15722 352 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 TRMT12Q53H54 448 aaKnown RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 XKR7Q5GH72 579 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 C6orf136Q5SQH8 315 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 HOMEZQ8IX15 550 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 CLHC1Q8NHS4 586 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 ZPLD1Q8TCW7 415 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 ABTB1Q969K4 478 aaPredicted RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 METTL2AQ96IZ6 378 aaKnown RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 TSSK3Q96PN8 268 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 TM9SF2Q99805 663 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 OSBPL11Q9BXB4 747 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 BRINP2Q9C0B6 783 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 CLEC4MQ9H2X3 399 aaPredicted RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 MANSC1Q9H8J5 431 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 MYNNQ9NPC7 610 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 PFDN4Q9NQP4 134 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 SLC35C2Q9NQQ7 365 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 RASSF1Q9NS23 344 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 GIMAP4Q9NUV9 329 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 BCAP29Q9UHQ4 241 aa9.46□□□□□ -0.9
TTC28-207ENST00000490475 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.46□□□□□ -0.9
TTC28-207ENST00000490475 MBD3L4A6NDZ8 208 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 MBD3L3A6NE82 208 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 TUBAL3A6NHL2 446 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 OR6C70A6NIJ9 312 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 MBD3L5A6NJ08 208 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 A6NNC1 897 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 TO15178 435 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 SLITRK5O94991 958 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 BCKDHAP12694 445 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 CYP4B1P13584 511 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 CPN1P15169 458 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 SDC1P18827 310 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 DLX5P56178 289 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 PPP2R2AP63151 447 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 MRPS35P82673 323 aaKnown RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 PLCXD2Q0VAA5 305 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 EFR3AQ14156 821 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 EXOSC7Q15024 291 aaKnown RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 DAZAP2Q15038 168 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 PDCD2Q16342 344 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 PRICKLE4Q2TBC4 344 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ATP6AP1LQ52LC2 224 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ANKRD26P1Q6NSI1 321 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 AAGABQ6PD74 315 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 LIX1LQ8IVB5 337 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ZZZ3Q8IYH5 903 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 MBD3L2Q8NHZ7 208 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 ZNF675Q8TD23 568 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ZNF75CPQ92670 426 aaPredicted RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 KAT2AQ92830 837 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 CTHRC1Q96CG8 243 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 TUBGCP3Q96CW5 907 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 FCRL1Q96LA6 429 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 PPP3R2Q96LZ3 170 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 DOCK7Q96N67 2140 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 GNRHR2Q96P88 292 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ALPK1Q96QP1 1244 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 CCT8L2Q96SF2 557 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 C1orf50Q9BV19 199 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 NXF5Q9H1B4 397 aaKnown RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 CXXC4Q9H2H0 198 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 AKTIPQ9H8T0 292 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ANKRA2Q9H9E1 313 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 HHATLQ9HCP6 504 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 MAT2BQ9NZL9 334 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 KLRF1Q9NZS2 232 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ZNF639Q9UID6 485 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 ST6GALNAC2Q9UJ37 374 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 CAMK2AQ9UQM7 478 aa9.45□□□□□ -0.9
TTC28-207ENST00000490475 WBP11Q9Y2W2 641 aaKnown RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 MRPS18CQ9Y3D5 142 aaKnown RBP9.45□□□□□ -0.9
TTC28-207ENST00000490475 FRG2CA6NGY1 282 aa9.44□□□□□ -0.9
TTC28-207ENST00000490475 MYO1GB0I1T2 1018 aa9.44□□□□□ -0.9
TTC28-207ENST00000490475 SNPHO15079 494 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms