RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 UBE2V2Q15819 145 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ADPRMQ3LIE5 342 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 UTF1Q5T230 341 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 MEDAGQ5VYS4 303 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 SLX4IPQ5VYV7 408 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 PAMR1Q6UXH9 720 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 LPCAT2Q7L5N7 544 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ZSCAN30Q86W11 494 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 PARGQ86W56 976 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 MISPQ8IVT2 679 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ZBED8Q8IZ13 594 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ELMO2Q96JJ3 720 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 OR5M11Q96RB7 305 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 OPN3Q9H1Y3 402 aaPredicted RBP2.94□□□□□ -1.94
CD46-216ENST00000490278 MEPEQ9NQ76 525 aaPredicted RBP2.94□□□□□ -1.94
CD46-216ENST00000490278 PRR34Q9NV39 138 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ELOVL2Q9NXB9 296 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ATXN10Q9UBB4 475 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 ATP6V1HQ9UI12 483 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 TP53TG3Q9ULZ0 132 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 FOXJ3Q9UPW0 622 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 VSIG4Q9Y279 399 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 CUX2O14529 1486 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 IGHV3-35A0A0C4DH35 117 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 WASHC1A8K0Z3 465 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 WASH3PC4AMC7 463 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 PPIHO43447 177 aaKnown RBP2.93□□□□□ -1.94
CD46-216ENST00000490278 VPS26AO75436 327 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 DUSP14O95147 198 aaKnown RBP2.93□□□□□ -1.94
CD46-216ENST00000490278 TRIM16O95361 564 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 APBB3O95704 486 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 IGKV3-15P01624 115 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 SLC35E2P0CK97 266 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 GDF1P27539 372 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 ACVR1BP36896 505 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 MDH2P40926 338 aaKnown RBP2.93□□□□□ -1.94
CD46-216ENST00000490278 XCR1P46094 333 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 HSF2Q03933 536 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 PUDPQ08623 228 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 DPYSQ14117 519 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 SERTAD2Q14140 314 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 TFDP1Q14186 410 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 RFTN1Q14699 578 aaPredicted RBP2.93□□□□□ -1.94
CD46-216ENST00000490278 TGIF1Q15583 401 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 CAMK4Q16566 473 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 CDKN3Q16667 212 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 GSG1Q2KHT4 349 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 QRICH1Q2TAL8 776 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 C12orf60Q5U649 245 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 SLC39A4Q6P5W5 647 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 UNC5DQ6UXZ4 953 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 WASH2PQ6VEQ5 465 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 SERAC1Q96JX3 654 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 TBC1D10AQ9BXI6 508 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 ELOVL4Q9GZR5 314 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 ECT2Q9H8V3 914 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 LPAR2Q9HBW0 351 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 POLD4Q9HCU8 107 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 TNFRSF19Q9NS68 423 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 C1orf123Q9NWV4 160 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 DPM3Q9P2X0 92 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 SLC2A6Q9UGQ3 507 aa2.93□□□□□ -1.94
CD46-216ENST00000490278 EIF3LQ9Y262 564 aaKnown RBP2.93□□□□□ -1.94
CD46-216ENST00000490278 BICDL2A1A5D9 508 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 FAM168BA1KXE4 195 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 FAM220BPB1ANY3 271 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 CASKO14936 926 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 AKR7A3O95154 331 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 JCHAINP01591 159 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 CA3P07451 260 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 UQCRBP14927 111 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 DPP4P27487 766 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 AXLP30530 894 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 PLOD1Q02809 727 aaPredicted RBP2.92□□□□□ -1.94
CD46-216ENST00000490278 CD47Q08722 323 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 PDZK1IP1Q13113 114 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 CYP51A1Q16850 503 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 PAN3Q58A45 887 aaKnown RBP2.92□□□□□ -1.94
CD46-216ENST00000490278 TMEM184AQ6ZMB5 413 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 EFCAB13Q8IY85 973 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 FBXL16Q8N461 479 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 CCDC26Q8TAB7 109 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 SELENOMQ8WWX9 145 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 VSTM2LQ96N03 204 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 CASD1Q96PB1 797 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 TBCDQ9BTW9 1192 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 PAXXQ9BUH6 204 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 FICDQ9BVA6 458 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 GALPQ9UBC7 116 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 Q9UF83 564 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 DUSP12Q9UNI6 340 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 USP6P35125 1406 aa2.92□□□□□ -1.94
CD46-216ENST00000490278 METP08581 1390 aa2.91□□□□□ -1.94
CD46-216ENST00000490278 PARD3Q8TEW0 1356 aa2.91□□□□□ -1.94
CD46-216ENST00000490278 CCDC7Q96M83 1385 aa2.91□□□□□ -1.94
CD46-216ENST00000490278 A0A0U1RQV5 110 aa2.91□□□□□ -1.94
CD46-216ENST00000490278 FRG2CA6NGY1 282 aa2.91□□□□□ -1.94
CD46-216ENST00000490278 LRRC30A6NM36 301 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms