RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 LRIG3Q6UXM1 1119 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 CROCCP2Q86T23 111 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 FNDC5Q8NAU1 212 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 ACBD4Q8NC06 268 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 ZBTB9Q96C00 473 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 C3orf14Q9HBI5 128 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 NPDC1Q9NQX5 325 aaPredicted RBP17.98■□□□□ 0.47
SMC4-222ENST00000490207 PPP4R1LQ9P1A2 415 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 ATP6V1HQ9UI12 483 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 DKKL1Q9UK85 242 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 FBXL2Q9UKC9 423 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 MRTO4Q9UKD2 239 aaKnown RBP17.98■□□□□ 0.47
SMC4-222ENST00000490207 ABCG2Q9UNQ0 655 aa17.98■□□□□ 0.47
SMC4-222ENST00000490207 KIAA1549Q9HCM3 1950 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 ITM2AO43736 263 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 IL33O95760 270 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 ACTL6AO96019 429 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 DHRS4L1P0CG22 281 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 EFNA1P20827 205 aaPredicted RBP17.97■□□□□ 0.47
SMC4-222ENST00000490207 MSX1P28360 303 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 RFX3P48380 749 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 GAS1P54826 345 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 PSMD4P55036 377 aaKnown RBP17.97■□□□□ 0.47
SMC4-222ENST00000490207 PTGR1Q14914 329 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 SF3B4Q15427 424 aaKnown RBP eCLIP17.97■□□□□ 0.472e-8■■■■□ 23.1
SMC4-222ENST00000490207 TNFAIP8L3Q5GJ75 292 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 C6orf136Q5SQH8 315 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 SEM1Q6ZVN7 128 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 IFNEQ86WN2 208 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 LACC1Q8IV20 430 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 NUP43Q8NFH3 380 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 OR4K17Q8NGC6 315 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 CEP70Q8NHQ1 597 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 TUBGCP3Q96CW5 907 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 WDYHV1Q96HA8 205 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 MS4A4EQ96PG1 132 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 FLRT3Q9NZU0 649 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 ACTL7BQ9Y614 415 aa17.97■□□□□ 0.47
SMC4-222ENST00000490207 FBN2P35556 2912 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 KDM4EB2RXH2 506 aaPredicted RBP17.96■□□□□ 0.47
SMC4-222ENST00000490207 ZWINTO95229 277 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 KCNH1O95259 989 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 EPPINO95925 133 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 IGFBP2P18065 325 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 GABRA3P34903 492 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 PRKAG1P54619 331 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 ABCE1P61221 599 aaKnown RBP17.96■□□□□ 0.47
SMC4-222ENST00000490207 PDCD2Q16342 344 aaPredicted RBP17.96■□□□□ 0.47
SMC4-222ENST00000490207 SLC25A35Q3KQZ1 300 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 VPS26BQ4G0F5 336 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 OR5M10Q6IEU7 315 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 LIX1LQ8IVB5 337 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 ZNF781Q8N8C0 355 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 CDRT4Q8N9R6 151 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 OR7A2PQ8NGA2 310 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 PIK3R3Q92569 461 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 GIMAP5Q96F15 307 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 RMND5BQ96G75 393 aaPredicted RBP17.96■□□□□ 0.47
SMC4-222ENST00000490207 TREX2Q9BQ50 279 aaPredicted RBP17.96■□□□□ 0.47
SMC4-222ENST00000490207 KCNK9Q9NPC2 374 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 TAS2R10Q9NYW0 307 aa17.96■□□□□ 0.47
SMC4-222ENST00000490207 APCP25054 2843 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 GXYLT2A0PJZ3 443 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 HSPB2A8KAH6 182 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 C17orf51A8MQB3 221 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 EMC8O43402 210 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 FADS1O60427 444 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 WNT3P56703 355 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 STX5Q13190 355 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 MAD2L1Q13257 205 aaPredicted RBP17.95■□□□□ 0.46
SMC4-222ENST00000490207 MLC1Q15049 377 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 HSPB2Q16082 182 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 IL23RQ5VWK5 629 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 ZNF295-AS1Q8N0V1 137 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 TNIP2Q8NFZ5 429 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 FBXO30Q8TB52 745 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 GPR151Q8TDV0 419 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 SLC9A6Q92581 669 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 HOXB13Q92826 284 aaPredicted RBP17.95■□□□□ 0.46
SMC4-222ENST00000490207 PGM2Q96G03 612 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 TRIB1Q96RU8 372 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 ZNF395Q9H8N7 513 aaPredicted RBP17.95■□□□□ 0.46
SMC4-222ENST00000490207 FAM120CQ9NX05 1096 aaKnown RBP17.95■□□□□ 0.46
SMC4-222ENST00000490207 NTMQ9P121 344 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 EIF3LQ9Y262 564 aaKnown RBP17.95■□□□□ 0.46
SMC4-222ENST00000490207 RAP2CQ9Y3L5 183 aa17.95■□□□□ 0.46
SMC4-222ENST00000490207 INTS1Q8N201 2190 aaKnown RBP17.95■□□□□ 0.46
SMC4-222ENST00000490207 MED12Q93074 2177 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 LRBAP50851 2863 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 B4DXG7 233 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 H0Y3Z8 333 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 NKX2-2O95096 273 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 ACP2P11117 423 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 LAMP1P11279 417 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 BGNP21810 368 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 TCEA1P23193 301 aaKnown RBP17.94■□□□□ 0.46
SMC4-222ENST00000490207 DPP4P27487 766 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 SSTR2P30874 369 aa17.94■□□□□ 0.46
SMC4-222ENST00000490207 CLK3P49761 638 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms