RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 TMEM245Q9H330 911 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 RIBC2Q9H4K1 309 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 HOMER3Q9NSC5 361 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 PNPLA3Q9NST1 481 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 SLC35D1Q9NTN3 355 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.11□□□□□ -2.07
NF1-213ENST00000489712 CGNQ9P2M7 1197 aaKnown RBP2.11□□□□□ -2.07
NF1-213ENST00000489712 ANKMY1Q9P2S6 941 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 TBK1Q9UHD2 729 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 DIMT1Q9UNQ2 313 aaKnown RBP2.11□□□□□ -2.07
NF1-213ENST00000489712 RABL2BQ9UNT1 228 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 PLA2G4CQ9UP65 541 aa2.11□□□□□ -2.07
NF1-213ENST00000489712 DHX29Q7Z478 1369 aaKnown RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 MACROD2A1Z1Q3 448 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 TLR4O00206 839 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 SLC28A1O00337 649 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 EEF2KO00418 725 aaKnown RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 SLC17A2O00624 439 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 CLDN3O15551 220 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 GMFGO60234 142 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 LCMT2O60294 686 aaKnown RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 PDE5AO76074 875 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 SFTPBP07988 381 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 WNT2P09544 360 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 NUDT17P0C025 328 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 TSPY4P0CV99 314 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 TSPY10P0CW01 314 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 KRT13P13646 458 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 MAGEA4P43358 317 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 IFNAR2P48551 515 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 GEMP55040 296 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 CCZ1BP86790 482 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 CCZ1P86791 482 aaPredicted RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 ZNF33BQ06732 778 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 GIT2Q14161 759 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 KARSQ15046 597 aaKnown RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 KYAT1Q16773 422 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 GLYR1Q49A26 553 aaPredicted RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 Q6P435 159 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 ARSKQ6UWY0 536 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 DLEU7Q6UYE1 221 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 ADAMTSL5Q6ZMM2 481 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 MOB1BQ7L9L4 216 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 ADAMTSL2Q86TH1 951 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 MKXQ8IYA7 352 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 LINC00518Q8N0U6 118 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 NFAM1Q8NET5 270 aaPredicted RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 TMEM185AQ8NFB2 350 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 OR52E1Q8NGJ3 308 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 OR4L1Q8NH43 312 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 RNASE8Q8TDE3 154 aaKnown RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 HAS2Q92819 552 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 FAM46BQ96A09 425 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 CXorf58Q96LI9 332 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 TSPAN18Q96SJ8 248 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 CARD6Q9BX69 1037 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 ACPTQ9BZG2 426 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 TRPV6Q9H1D0 765 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 CARD9Q9H257 536 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 SLC26A1Q9H2B4 701 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 ZNF702PQ9H963 129 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 ESM1Q9NQ30 184 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 FARSBQ9NSD9 589 aaKnown RBP2.1□□□□□ -2.07
NF1-213ENST00000489712 PIGVQ9NUD9 493 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 NDUFA13Q9P0J0 144 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 TUBGCP4Q9UGJ1 667 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 DNPEPQ9ULA0 475 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 NUDCQ9Y266 331 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 U3KQV3 271 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 KIAA1217Q5T5P2 1943 aa2.1□□□□□ -2.07
NF1-213ENST00000489712 IGKV6-21A0A0C4DH24 114 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 CLRN2A0PK11 232 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 MFSD2BA6NFX1 497 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 YJEFN3A6XGL0 299 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 B4DXG7 233 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 GPR89AB7ZAQ6 455 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 H0YCG3 227 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 CYB561D2O14569 222 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 DIRAS3O95661 229 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 IGHV3-23P01764 117 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 IGHDP01880 384 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 CHRNGP07510 517 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 ALOX5P09917 674 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 ALPIP09923 528 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 H2AFZP0C0S5 128 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 GPR89BP0CG08 455 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 RALAP11233 206 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 NCF1P14598 390 aaPredicted RBP2.09□□□□□ -2.07
NF1-213ENST00000489712 TNNI3P19429 210 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 DNAJB1P25685 340 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 HSPA1LP34931 641 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 SLC26A2P50443 739 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 CNN1P51911 297 aaKnown RBP2.09□□□□□ -2.07
NF1-213ENST00000489712 EFNA3P52797 238 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 VCPP55072 806 aaKnown RBP2.09□□□□□ -2.07
NF1-213ENST00000489712 DIO3P55073 304 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 MSLNQ13421 630 aaPredicted RBP2.09□□□□□ -2.07
NF1-213ENST00000489712 KLF5Q13887 457 aaPredicted RBP2.09□□□□□ -2.07
NF1-213ENST00000489712 STX1AQ16623 288 aa2.09□□□□□ -2.07
NF1-213ENST00000489712 SHROOM1Q2M3G4 852 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms