RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PLAG1Q6DJT9 500 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 B3GNT8Q7Z7M8 397 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 GPR150Q8NGU9 434 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 PGAP3Q96FM1 320 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 ARHGAP39Q9C0H5 1083 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 FN3KQ9H479 309 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 KIAA0355O15063 1070 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 CDK4P11802 303 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 MSX1P28360 303 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 PCGF2P35227 344 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 EMX1Q04741 257 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 UNC5DQ6UXZ4 953 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 SERPINA12Q8IW75 414 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 GPR26Q8NDV2 337 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 HOXB13Q92826 284 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 DAZLQ92904 295 aaKnown RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 SYT11Q9BT88 431 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 CWH43Q9H720 699 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 B3GALT1Q9Y5Z6 326 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 SMAD6O43541 496 aaKnown RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 TGM5O43548 720 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 AGTR1P30556 359 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 CST6Q15828 149 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 PIP5KL1Q5T9C9 394 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 TRIM46Q7Z4K8 759 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 KIF18BQ86Y91 864 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 NEIL2Q969S2 332 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 RDH14Q9HBH5 336 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 USP36Q9P275 1121 aaKnown RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 TFP02787 698 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 SPCS2Q15005 226 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 WDR53Q7Z5U6 358 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 OR2T4Q8NH00 348 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 CRYGNQ8WXF5 182 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 C20orf27Q9GZN8 174 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 A0A0G2JMP0 313 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 PAHP00439 452 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 AK1P00568 194 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ADH6P28332 368 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 DUS1LQ6P1R4 473 aaKnown RBP16.66■□□□□ 0.26
NPHP4-209ENST00000489180 BOLLQ8N9W6 283 aaKnown RBP16.66■□□□□ 0.26
NPHP4-209ENST00000489180 OR4M2Q8NGB6 313 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 FIBINQ8TAL6 211 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ASF1BQ9NVP2 202 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ICKQ9UPZ9 632 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF35P13682 527 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 GGT2P36268 569 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 RAB28P51157 221 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 SLC22A10Q63ZE4 541 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 CPZQ66K79 652 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 SLAMF8Q9P0V8 285 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 GPR45Q9Y5Y3 372 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 CACNG2Q9Y698 323 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 EVI2BP34910 448 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ARL3P36405 182 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 SGSHP51688 502 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 SDR9C7Q8NEX9 313 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ADAMTS19Q8TE59 1207 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 NAA50Q9GZZ1 169 aaKnown RBP16.66■□□□□ 0.26
NPHP4-209ENST00000489180 DMRT3Q9NQL9 472 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 UBE2J1Q9Y385 318 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-209ENST00000489180 PSMB10P40306 273 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 CAMLGP49069 296 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 SQSTM1Q13501 440 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 SELPLGQ14242 412 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 GPR157Q5UAW9 335 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 NPRL2Q8WTW4 380 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 IL17CQ9P0M4 197 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 ANKMY1Q9P2S6 941 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 APOBEC3BQ9UH17 382 aaKnown RBP16.66■□□□□ 0.26
NPHP4-209ENST00000489180 BTNL2Q9UIR0 455 aa16.66■□□□□ 0.26
NPHP4-209ENST00000489180 TCRBV3S1A0A5B6 114 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 GABRR3A8MPY1 467 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 SEC14L5O43304 696 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 WDR45BQ5MNZ6 344 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 TCEAL3Q969E4 200 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 ELMOD3Q96FG2 381 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 TMEM121BQ9BXQ6 578 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 MYH15Q9Y2K3 1946 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 HPGDSO60760 199 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF888P0CJ79 500 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 CHFRQ96EP1 664 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 COQ10AQ96MF6 247 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 C7orf50Q9BRJ6 194 aaKnown RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 RNASET2O00584 256 aaKnown RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 SLC16A9Q7RTY1 509 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 TOR1AIP2Q8NFQ8 470 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 CNOT9Q92600 299 aaKnown RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 BCL7BQ9BQE9 202 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 LINC00597Q9H2U6 94 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 GLS2Q9UI32 602 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 USP22Q9UPT9 525 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 ARHGEF15O94989 841 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 C21orf33P30042 268 aaPredicted RBP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 RAB5BP61020 215 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPHP4-209ENST00000489180 TREX1Q9NSU2 369 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 KNG1P01042 644 aa16.65■□□□□ 0.26
NPHP4-209ENST00000489180 ALDOBP05062 364 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms