RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TUBA1CQ9BQE3 449 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 ZNF395Q9H8N7 513 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-206ENST00000489142 EML4Q9HC35 981 aaKnown RBP12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 ZDHHC2Q9UIJ5 367 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 WBP11Q9Y2W2 641 aaKnown RBP12.74□□□□□ -0.37
VTI1A-206ENST00000489142 PCDHGB3Q9Y5G1 929 aa12.74□□□□□ -0.37
VTI1A-206ENST00000489142 HSPB2A8KAH6 182 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 H0Y3Z8 333 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 TYROBPO43914 113 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 ZNF500O60304 480 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-206ENST00000489142 SLITRK5O94991 958 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 BPGMP07738 259 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 FGF4P08620 206 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 UQCRC1P31930 480 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 ZNF136P52737 540 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 MYBPHQ13203 477 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 ZNHIT3Q15649 155 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-206ENST00000489142 HSPB2Q16082 182 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 DECR1Q16698 335 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 SLC25A35Q3KQZ1 300 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 RNF165Q6ZSG1 346 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 LACC1Q8IV20 430 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 C9orf106Q8NAJ2 232 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 OR7A2PQ8NGA2 310 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 OR4K17Q8NGC6 315 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 RNF138Q8WVD3 245 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 C14orf79Q96F83 325 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 RMND5BQ96G75 393 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-206ENST00000489142 METTL2AQ96IZ6 378 aaKnown RBP12.73□□□□□ -0.37
VTI1A-206ENST00000489142 SFXN2Q96NB2 322 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 YIPF4Q9BSR8 244 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
VTI1A-206ENST00000489142 CENPHQ9H3R5 247 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 DSN1Q9H410 356 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 Q9N2J8 555 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 ITGB1BP2Q9UKP3 347 aa12.73□□□□□ -0.37
VTI1A-206ENST00000489142 FAM47E-STBD1D6RA91 191 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-206ENST00000489142 FADS1O60427 444 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 ACTL6AO96019 429 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 IL2RAP01589 272 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 IGKV1D-16P01601 117 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 PRPS2P11908 318 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 DPP4P27487 766 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 SRD5A2P31213 254 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-206ENST00000489142 ETV4P43268 484 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 MANFP55145 182 aaKnown RBP12.72□□□□□ -0.37
VTI1A-206ENST00000489142 GFRA1P56159 465 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 PDE7AQ13946 482 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 PTGR1Q14914 329 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 CYP27C1Q4G0S4 372 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 XKR7Q5GH72 579 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 NSUN5P2Q63ZY6 315 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 MARCH3Q86UD3 253 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 MED12LQ86YW9 2145 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 MREGQ8N565 214 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 OR5M1Q8NGP8 315 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 ZFP28Q8NHY6 868 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 GPR151Q8TDV0 419 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 SLC9A6Q92581 669 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 PPP1R36Q96LQ0 422 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 ZNF559Q9BR84 538 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 TMEM109Q9BVC6 243 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 MED11Q9P086 117 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 TMED5Q9Y3A6 229 aa12.72□□□□□ -0.37
VTI1A-206ENST00000489142 ANKRD17O75179 2603 aaKnown RBP12.72□□□□□ -0.37
VTI1A-206ENST00000489142 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 DVL2O14641 736 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 SCAMP2O15127 329 aaKnown RBP12.71□□□□□ -0.37
VTI1A-206ENST00000489142 ITM2AO43736 263 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 ZIC3O60481 467 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 UTS2O95399 124 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 IL33O95760 270 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 ACP2P11117 423 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 GCKP35557 465 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 TIMP3P35625 211 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 HPCAL1P37235 193 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 FRKP42685 505 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-206ENST00000489142 SERPINB4P48594 390 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 LHX2P50458 406 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 PSPHP78330 225 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 MRPS22P82650 360 aaKnown RBP12.71□□□□□ -0.37
VTI1A-206ENST00000489142 RCAN2Q14206 197 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 ATP6AP1LQ52LC2 224 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 POMZP3Q6PJE2 187 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 TMEM200AQ86VY9 491 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 NUDCD3Q8IVD9 361 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 KRTCAP2Q8N6L1 136 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 NUP43Q8NFH3 380 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 OR2M3Q8NG83 312 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 PPP1R14CQ8TAE6 165 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms