RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	SUCLG1	P53597	346 aa	Known RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	EFR3A	Q14156	821 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	RCAN2	Q14206	197 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	POU4F3	Q15319	338 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	IMPG1	Q17R60	797 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235		Q6ZSR9	355 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	ZNF551	Q7Z340	670 aa	Predicted RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	GALNT10	Q86SR1	603 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	C10orf107	Q8IVU9	208 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	SAMD14	Q8IZD0	417 aa	Predicted RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	C4orf33	Q8N1A6	199 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	OR2L13	Q8N349	312 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	ELP4	Q96EB1	424 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	RMND5B	Q96G75	393 aa	Predicted RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	UCN2	Q96RP3	112 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	FOXC2	Q99958	501 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	KLHDC3	Q9BQ90	382 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	RBM24	Q9BX46	236 aa	Known RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	PLEKHF2	Q9H8W4	249 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	GIMAP4	Q9NUV9	329 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	OXSM	Q9NWU1	459 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	TAS2R9	Q9NYW1	312 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	MED11	Q9P086	117 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	SENP1	Q9P0U3	644 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	DKKL1	Q9UK85	242 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	C19orf53	Q9UNZ5	99 aa	Predicted RBP	10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	STK38L	Q9Y2H1	464 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235	OR10H1	Q9Y4A9	318 aa		10.15	□□□□□ -0.78
PCYT1A-215	ENST00000488235		A0A1W2PNV4	684 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235		A8MXE2	369 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	TMEM233	B4DJY2	109 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NPIPB8	E9PQR5	432 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SIAH2	O43255	324 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	HCRTR2	O43614	444 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GMFG	O60234	142 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RSL1D1	O76021	490 aa	Known RBP	10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	KRT20	P35900	424 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CLDN20	P56880	219 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	DNAJB13	P59910	316 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SORD	Q00796	357 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	VWA1	Q6PCB0	445 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ENPP6	Q6UWR7	440 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PAMR1	Q6UXH9	720 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZAR1	Q86SH2	424 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	MARCH3	Q86UD3	253 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	EXOC3L1	Q86VI1	746 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	UBQLNL	Q8IYU4	475 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	OR4K17	Q8NGC6	315 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CLHC1	Q8NHS4	586 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FIG4	Q92562	907 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PIK3R3	Q92569	461 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NINJ1	Q92982	152 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	WNT2B	Q93097	391 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FCRL1	Q96LA6	429 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NPAS1	Q99742	590 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SFXN3	Q9BWM7	321 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GATA5	Q9BWX5	397 aa	Predicted RBP	10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	MIEF1	Q9NQG6	463 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZNF337	Q9Y3M9	751 aa		10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NSD1	Q96L73	2696 aa	Predicted RBP	10.14	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	OR2M5	A3KFT3	312 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CCDC151	A5D8V7	595 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	KIF2A	O00139	706 aa	Predicted RBP	10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	COQ9	O75208	318 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	IL33	O95760	270 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	HRG	P04196	525 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CHRNG	P07510	517 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CPA3	P15088	417 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SDC1	P18827	310 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	KRT4	P19013	534 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	EFNA1	P20827	205 aa	Predicted RBP	10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CHM	P24386	653 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CCKAR	P32238	428 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GABRA3	P34903	492 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	MAP3K8	P41279	467 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RFX3	P48380	749 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	DSCR4	P56555	118 aa	Predicted RBP	10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SLC18A2	Q05940	514 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FAM27E3	Q08E93	113 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FOXD4	Q12950	439 aa	Predicted RBP	10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	HSPB3	Q12988	150 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PCLAF	Q15004	111 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CYP27C1	Q4G0S4	372 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RFTN2	Q52LD8	501 aa	Predicted RBP	10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RAET1L	Q5VY80	246 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	AAGAB	Q6PD74	315 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	TDRP	Q86YL5	185 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	KRTAP1-3	Q8IUG1	177 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GRAMD2A	Q8IUY3	354 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	OR2W6P	Q8NHA6	318 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FBXO30	Q8TB52	745 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	DUSP19	Q8WTR2	217 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NUDT8	Q8WV74	236 aa		10.13	□□□□□ -0.79
PCYT1A-215	ENST00000488235	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.13	□□□□□ -0.79

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