RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 OR2M7Q8NG81 312 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 CPT1CQ8TCG5 803 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 ADAMTS15Q8TE58 950 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 GRHL3Q8TE85 626 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 ZFP90Q8TF47 636 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 SNRNP40Q96DI7 357 aaKnown RBP10.14□□□□□ -0.79
UBE4B-210ENST00000488228 SLC35A4Q96G79 324 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 STACQ99469 402 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 BTBD2Q9BX70 525 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 PIGUQ9H490 435 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 METTL7AQ9H8H3 244 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 GALNT9Q9HCQ5 603 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 DUSP22Q9NRW4 184 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 ASF1BQ9NVP2 202 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 FBXO34Q9NWN3 711 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 TUBA8Q9NY65 449 aaPredicted RBP10.14□□□□□ -0.79
UBE4B-210ENST00000488228 SLC25A37Q9NYZ2 338 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 KLRF1Q9NZS2 232 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 MED12Q93074 2177 aa10.14□□□□□ -0.79
UBE4B-210ENST00000488228 NPIPA5A0A0B4J1W7 369 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 LRRC3CA6NJW4 275 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 FAM166BA8MTA8 275 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 NPIPA7E9PJI5 369 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 PYCARD-AS1I3L0S3 204 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 FBP2O00757 339 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 SCO2O43819 266 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 KCNK2O95069 426 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 RASAL1O95294 804 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 IL33O95760 270 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 SNRPB2P08579 225 aaKnown RBP10.13□□□□□ -0.79
UBE4B-210ENST00000488228 NPIPA8P0DM63 369 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 OR12D1P0DN82 309 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 NAGAP17050 411 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 TRPC1P48995 793 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 RNF144AP50876 292 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-210ENST00000488228 MVDP53602 400 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 PSPHP78330 225 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 TLE1Q04724 770 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 FUT5Q11128 374 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 EFR3AQ14156 821 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 GRAMD1BQ3KR37 738 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 RNFT1Q5M7Z0 435 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 LRIF1Q5T3J3 769 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 REP15Q6BDI9 236 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
UBE4B-210ENST00000488228 ZCCHC12Q6PEW1 402 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 TREML1Q86YW5 311 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 POU5F2Q8N7G0 328 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 MIPOL1Q8TD10 442 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 DOHHQ9BU89 302 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 OSBPL11Q9BXB4 747 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 TRIM8Q9BZR9 551 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 IKZF5Q9H5V7 419 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 TPT1P8Q9HAU6 139 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 IL1RL2Q9HB29 575 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 PROK2Q9HC23 129 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 GIN1Q9NXP7 522 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-210ENST00000488228 LEF1Q9UJU2 399 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-210ENST00000488228 ADAM21Q9UKJ8 722 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 NDUFAF1Q9Y375 327 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 PCDHB14Q9Y5E9 798 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 PCDHGB6Q9Y5F9 930 aa10.13□□□□□ -0.79
UBE4B-210ENST00000488228 GCN1Q92616 2671 aaKnown RBP10.13□□□□□ -0.79
UBE4B-210ENST00000488228 HEATR5AQ86XA9 2040 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 HELZ2Q9BYK8 2649 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 HIVEP3Q5T1R4 2406 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 FLNCQ14315 2725 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 TRBV5-3A0A0A0MS03 114 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 KLRC4-KLRK1H3BQV0 150 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 HMGN4O00479 90 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 HS6ST1O60243 411 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 ABCB7O75027 752 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 UTS2O95399 124 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 ZIC2O95409 532 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 ZCCHC18P0CG32 403 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 ZNF24P17028 368 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 MST1P26927 711 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 EVI2BP34910 448 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 PTGDSP41222 190 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 CASP3P42574 277 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 PNLIPRP2P54317 469 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 RPP38P78345 283 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 STX5Q13190 355 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 NFYCQ13952 458 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 CAPRIN1Q14444 709 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 NUP54Q7Z3B4 507 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 C16orf62Q7Z3J2 963 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 PIGWQ7Z7B1 504 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 FAM98AQ8NCA5 519 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 ZNF597Q96LX8 424 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 JSRP1Q96MG2 331 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 PHF12Q96QT6 1004 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 CCT8L2Q96SF2 557 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 SECISBP2Q96T21 854 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 FAM173AQ9BQD7 235 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 CPPED1Q9BRF8 314 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 SLC39A3Q9BRY0 314 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms