RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CDX4O14627 284 aaPredicted RBP8.76□□□□□ -1.01
SF3B1-211ENST00000487698 PCDH17O14917 1159 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 SLC16A6O15403 523 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 IGKV3-11P04433 115 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 SMIM18P0DKX4 95 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 CT45A8P0DMV1 189 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 CT45A9P0DMV2 189 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 TRHRP34981 398 aaPredicted RBP8.76□□□□□ -1.01
SF3B1-211ENST00000487698 PGDP52209 483 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 SLC37A1P57057 533 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 EEF1A1P68104 462 aaKnown RBP8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ZNHIT3Q15649 155 aaPredicted RBP8.76□□□□□ -1.01
SF3B1-211ENST00000487698 MAPK14Q16539 360 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 NKAIN1Q4KMZ8 207 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 CT45A2Q5DJT8 189 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 TTC23Q5W5X9 447 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 KRT80Q6KB66 452 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF836Q6ZNA1 936 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ZAR1Q86SH2 424 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 PPP1R3BQ86XI6 285 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 PEX5LQ8IYB4 626 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 OFCC1Q8IZS5 231 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 CLIP4Q8N3C7 705 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 SLC5A8Q8N695 610 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ATG16L2Q8NAA4 619 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ZSCAN1Q8NBB4 408 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 PRRC1Q96M27 445 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 MUS81Q96NY9 551 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ALPK1Q96QP1 1244 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 FEVQ99581 238 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 TRIM45Q9H8W5 580 aaPredicted RBP8.76□□□□□ -1.01
SF3B1-211ENST00000487698 APMAPQ9HDC9 416 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 BATF3Q9NR55 127 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 KRT84Q9NSB2 600 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 MAN2C1Q9NTJ4 1040 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 RLIMQ9NVW2 624 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 KIF17Q9P2E2 1029 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 FTSJ1Q9UET6 329 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 PCDHGA8Q9Y5G5 932 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 ORC6Q9Y5N6 252 aa8.76□□□□□ -1.01
SF3B1-211ENST00000487698 TRBV4-1A0A0J9YWV2 114 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 TPST2O60704 377 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 DDAH2O95865 285 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 IGKV1D-16P01601 117 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 DBIP07108 87 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 H1F0P07305 194 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 HBQ1P09105 142 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF806P0C7X5 589 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ATXN8OSP0DMR3 200 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ANXA8P13928 327 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 CD59P13987 128 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 CBLP22681 906 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ELAVL4P26378 380 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 CSTF2P33240 577 aaKnown RBP eCLIP8.75□□□□□ -1.013e-11■■■□□ 17
SF3B1-211ENST00000487698 POLR2IP36954 125 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 IL11RAQ14626 422 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 LARS2Q15031 903 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 GPR68Q15743 365 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 MFSD4BQ5TF39 518 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 RNF220Q5VTB9 566 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 FIGNL1Q6PIW4 674 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 GALNT5Q7Z7M9 940 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 TMEM151BQ8IW70 566 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 AGBL5Q8NDL9 886 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 PLPP5Q8NEB5 264 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 STT3BQ8TCJ2 826 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 RHBDD1Q8TEB9 315 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ATOH1Q92858 354 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 RMND5BQ96G75 393 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 SENP5Q96HI0 755 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ITPAQ9BY32 194 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 GRIP2Q9C0E4 1043 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 PNO1Q9NRX1 252 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 MKL2Q9ULH7 1088 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 A0A1W2PRQ8 180 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 SYNDIG1LA6NDD5 238 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 TRIM64A6NGJ6 449 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 EFCAB7A8K855 629 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 H3BNH8 94 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 AGRPO00253 132 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 PEX12O00623 359 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 FRS3O43559 492 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 UGT2B17O75795 530 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 CCNB2O95067 398 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 NID1P14543 1247 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 IL7RP16871 459 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 TNNI3P19429 210 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 PLAURQ03405 335 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 IL18R1Q13478 541 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 PIN1Q13526 163 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 DGCR6Q14129 220 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 SF3A2Q15428 464 aaKnown RBP8.75□□□□□ -1.01
SF3B1-211ENST00000487698 SEC23BQ15437 767 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 NSDHLQ15738 373 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 LIN52Q52LA3 116 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 EIPR1Q53HC9 387 aa8.75□□□□□ -1.01
SF3B1-211ENST00000487698 ISLR2Q6UXK2 745 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms