RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ZNF671Q8TAW3 534 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 RNASE8Q8TDE3 154 aaKnown RBP2.92□□□□□ -1.94
LINC00888-204ENST00000487386 VN1R17PQ8TDU5 208 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 BIRC7Q96CA5 298 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 RAB3CQ96E17 227 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 ZIM3Q96PE6 472 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 DCTPP1Q9H773 170 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 ADGRL4Q9HBW9 690 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 IL1RAPL2Q9NP60 686 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 ACOXLQ9NUZ1 547 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 CWC25Q9NXE8 425 aaPredicted RBP2.92□□□□□ -1.94
LINC00888-204ENST00000487386 RAI14Q9P0K7 980 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 MAD2L2Q9UI95 211 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 EMCNQ9ULC0 261 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 USP16Q9Y5T5 823 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 TIAM2Q8IVF5 1701 aa2.92□□□□□ -1.94
LINC00888-204ENST00000487386 LTBP1Q14766 1721 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 KIAA1551Q9HCM1 1747 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 SMIM30A4D0T7 59 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 CDX4O14627 284 aaPredicted RBP2.91□□□□□ -1.94
LINC00888-204ENST00000487386 AKAP3O75969 853 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 PRAMEF12O95522 483 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 NUDT14O95848 222 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 IGHDP01880 384 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 IGKV5-2P06315 115 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 P0C879 139 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 LAMP1P11279 417 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 CTNNB1P35222 781 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 TNNT3P45378 269 aaPredicted RBP2.91□□□□□ -1.94
LINC00888-204ENST00000487386 HERV-K104P63124 156 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 RTL6Q6ICC9 239 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 MFSD7Q6UXD7 560 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 APOOLQ6UXV4 268 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 STOX1Q6ZVD7 989 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 ANKRD23Q86SG2 305 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 GPR137CQ8N3F9 429 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 RDH11Q8TC12 318 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 CFAP36Q96G28 342 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 FAM173AQ9BQD7 235 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 DESI2Q9BSY9 194 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 FUNDC2Q9BWH2 189 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 GPR174Q9BXC1 333 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 TEX13AQ9BXU3 409 aaPredicted RBP2.91□□□□□ -1.94
LINC00888-204ENST00000487386 AKIRIN1Q9H9L7 192 aaPredicted RBP2.91□□□□□ -1.94
LINC00888-204ENST00000487386 IL17CQ9P0M4 197 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 CLEC4EQ9ULY5 219 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 MRPS2Q9Y399 296 aaKnown RBP2.91□□□□□ -1.94
LINC00888-204ENST00000487386 ADAMTSL1Q8N6G6 1762 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 C10orf71Q711Q0 1435 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 SH3TC1Q8TE82 1336 aa2.91□□□□□ -1.94
LINC00888-204ENST00000487386 USP42Q9H9J4 1324 aaKnown RBP2.91□□□□□ -1.94
LINC00888-204ENST00000487386 LRRD1A4D1F6 860 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 C5orf51A6NDU8 294 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 K7ERI5 159 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 SH2D1BO14796 132 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 SURF6O75683 361 aaKnown RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 REC8O95072 547 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 SERPINF2P08697 491 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 MX1P20591 662 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 ATP5DP30049 168 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 MAT2AP31153 395 aaKnown RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 ANP32AP39687 249 aaKnown RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 MAGEA9P43362 315 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 RGRP47804 291 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 ZNF131P52739 623 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 ERVPABLB-1P60509 514 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 RPS4XP62701 263 aaKnown RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 RCN2Q14257 317 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 KIAA0040Q15053 153 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 TRADDQ15628 312 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 CD226Q15762 336 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 PARP10Q53GL7 1025 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 C9orf129Q5T035 196 aaKnown RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 CASC1Q6TDU7 716 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 TMEM270Q6UE05 265 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 C2orf66Q6UXQ4 117 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 PPP1R42Q7Z4L9 355 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 UBQLNLQ8IYU4 475 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 SLC34A3Q8N130 599 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 P3H4Q92791 437 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 PHYHIPLQ96FC7 376 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 RPGRIP1Q96KN7 1286 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 GPR137Q96N19 417 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 TRIM9Q9C026 710 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 C2orf40Q9H1Z8 148 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 MMADHCQ9H3L0 296 aaPredicted RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 IKZF5Q9H5V7 419 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 DCLRE1BQ9H816 532 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 TRPC4Q9UBN4 977 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 STX8Q9UNK0 236 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 MOKQ9UQ07 419 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 RPH3AQ9Y2J0 694 aaPredicted RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 EP400Q96L91 3159 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 DDX60LQ5H9U9 1706 aaKnown RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 CDHR2Q9BYE9 1310 aa2.9□□□□□ -1.95
LINC00888-204ENST00000487386 COL1A1P02452 1464 aaPredicted RBP2.9□□□□□ -1.95
LINC00888-204ENST00000487386 RFX7Q2KHR2 1363 aa2.89□□□□□ -1.95
LINC00888-204ENST00000487386 ECM29Q5VYK3 1845 aa2.89□□□□□ -1.95
LINC00888-204ENST00000487386 KIF13BQ9NQT8 1826 aa2.89□□□□□ -1.95
LINC00888-204ENST00000487386 TRABD2BA6NFA1 517 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms