RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 HBEGFQ99075 208 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 KLHL4Q9C0H6 718 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF701Q9NV72 531 aaPredicted RBP17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 TMCO1Q9UM00 188 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF337Q9Y3M9 751 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 ANK3Q12955 4377 aaKnown RBP17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 DSCAMO60469 2012 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 CRLF1O75462 422 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 ESRRBO95718 433 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 RBP1P09455 135 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 TBXA2RP21731 343 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 EVI2BP34910 448 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 CLDN20P56880 219 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 KRTAP1-1Q07627 177 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 CAPRIN1Q14444 709 aaKnown RBP17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 BEX5Q5H9J7 111 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF704Q6ZNC4 412 aaPredicted RBP17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 SLC44A2Q8IWA5 706 aaPredicted RBP17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR5M1Q8NGP8 315 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 TMEM171Q8WVE6 324 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 SNX6Q9UNH7 406 aa17.49■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR2M5A3KFT3 312 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 H3BML4 177 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 KLF4O43474 513 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 SMIM24O75264 130 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 OTCP00480 354 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 IL3P08700 152 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 NID1P14543 1247 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 TSPAN8P19075 237 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 MRPS22P82650 360 aaKnown RBP17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 EXOC3L2Q2M3D2 409 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 FAM214BQ7L5A3 538 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF483Q8TF39 744 aaPredicted RBP17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 EXOSC8Q96B26 276 aaKnown RBP17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 MTBPQ96DY7 904 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 NMRK1Q9NWW6 199 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 FLRT3Q9NZU0 649 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 MED11Q9P086 117 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 MCM8Q9UJA3 840 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR10H1Q9Y4A9 318 aa17.48■□□□□ 0.39
SMPDL3A-202ENST00000487215 LINC01387J3KSC0 135 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 AQP8O94778 261 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 CDH13P55290 713 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 STX5Q13190 355 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 GANABQ14697 944 aaKnown RBP17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 TCHHL1Q5QJ38 904 aaPredicted RBP17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 METTL25Q8N6Q8 603 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR7G2Q8NG99 324 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 UHMK1Q8TAS1 419 aaKnown RBP17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 RTN4RQ9BZR6 473 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 CXorf56Q9H5V9 222 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 VPS29Q9UBQ0 182 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF225Q9UK10 706 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 COL6A5A8TX70 2615 aa17.47■□□□□ 0.39
SMPDL3A-202ENST00000487215 FADS1O60427 444 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 PLOD3O60568 738 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 PLAUP00749 431 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 MAGEA12P43365 314 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 NR1H2P55055 460 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 ATP5J2P56134 94 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 PSG6Q00889 435 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF155Q12901 538 aaPredicted RBP17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 TNK1Q13470 666 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 SH2D5Q6ZV89 423 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 SAMD14Q8IZD0 417 aaPredicted RBP17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 C1GALT1C1Q96EU7 318 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 STMN4Q9H169 189 aaPredicted RBP17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 SDHAF3Q9NRP4 125 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 TAS2R9Q9NYW1 312 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 ABCG2Q9UNQ0 655 aa17.46■□□□□ 0.39
SMPDL3A-202ENST00000487215 PCDH7O60245 1069 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 TMCC2O75069 709 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 SOX30O94993 753 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 OR4F21O95013 312 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 FCGR2AP12318 317 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 CHN1P15882 459 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 PPP3CBP16298 524 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 RPS3AP61247 264 aaKnown RBP17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 ETF1P62495 437 aaKnown RBP17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 RAE1P78406 368 aaKnown RBP17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 OCRLQ01968 901 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 SH2D4BQ5SQS7 431 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 UBAP2Q5T6F2 1119 aaKnown RBP17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 FAM9CQ8IZT9 166 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 ZNF611Q8N823 705 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 GFM2Q969S9 779 aaKnown RBP17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 PTGES2Q9H7Z7 377 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 SLC35C2Q9NQQ7 365 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 PLSCR4Q9NRQ2 329 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 GIMAP4Q9NUV9 329 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 SENP1Q9P0U3 644 aa17.45■□□□□ 0.38
SMPDL3A-202ENST00000487215 ATRQ13535 2644 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 HEATR5AQ86XA9 2040 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 MANBAO00462 879 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 HS3ST1O14792 307 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 HSD3B1P14060 373 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 HSD3B2P26439 372 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 PHBP35232 272 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 SLC6A8P48029 635 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 CKAP4Q07065 602 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms