RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CYB561D2O14569 222 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 DYNC1I1O14576 645 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 NDC80O14777 642 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 KLF11O14901 512 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 B4GAT1O43505 415 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 MED7O43513 233 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 HUS1O60921 280 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 CDC123O75794 336 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 KRT33AO76009 404 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 B3GAT3O94766 335 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 F7P08709 466 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 FAM157CP0CG43 387 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 ANPEPP15144 967 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 RPL35AP18077 110 aaKnown RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 WARSP23381 471 aaKnown RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 ACKR3P25106 362 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LMO2P25791 158 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 PRDX6P30041 224 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 CDH5P33151 784 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 OR1D2P34982 312 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 GNG11P61952 73 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 KCNJ10P78508 379 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 GPR50Q13585 617 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 FHL1Q13642 323 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 KIAA1644Q3SXP7 199 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 FASTKD1Q53R41 847 aaKnown RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 CMPK2Q5EBM0 449 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LDLRAP1Q5SW96 308 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TCEAL6Q6IPX3 200 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 IRGCQ6NXR0 463 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 C19orf48Q6RUI8 117 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LCLAT1Q6UWP7 414 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 SCARA5Q6ZMJ2 495 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LEKR1Q6ZMV7 388 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 RFPL4BQ6ZWI9 263 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 KIAA1328Q86T90 577 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 PHF13Q86YI8 300 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 ZDHHC17Q8IUH5 632 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LMNTD2Q8IXW0 634 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TMEM86AQ8N2M4 240 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 MARVELD2Q8N4S9 558 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TEX26Q8N6G2 289 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 CCDC185Q8N715 623 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TMEM35BQ8NCS4 154 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 OR2T11Q8NH01 316 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 GANCQ8TET4 914 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 GLYATL1Q969I3 302 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TOP1MTQ969P6 601 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 MRPL53Q96EL3 112 aaKnown RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LMLNQ96KR4 655 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 SENP8Q96LD8 212 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 IL12RB2Q99665 862 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 NKX3-1Q99801 234 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 MRPL45Q9BRJ2 306 aaKnown RBP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TMEM175Q9BSA9 504 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TSGA10Q9BZW7 698 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 LHX5Q9H2C1 402 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 SMYD3Q9H7B4 428 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 ATP13A3Q9H7F0 1226 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 C3orf14Q9HBI5 128 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 POLE3Q9NRF9 147 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.53□□□□□ -1.84
PTCD3-216ENST00000487043 ACOXLQ9NUZ1 547 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 PLEK2Q9NYT0 353 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 EPHA6Q9UF33 1036 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TEKT2Q9UIF3 430 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 GUCA1BQ9UMX6 200 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TFR2Q9UP52 801 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 PLCL2Q9UPR0 1127 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 OR1A2Q9Y585 309 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TANC1Q9C0D5 1861 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 TET1Q8NFU7 2136 aa3.53□□□□□ -1.84
PTCD3-216ENST00000487043 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 A0A087WZ39 114 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 A0A1B0GUV1 79 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ATP6AP2A0A1C7CYW4 349 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 P2RY10O00398 339 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 TRAPPC3O43617 180 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 OR6A2O95222 327 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SEC24AO95486 1093 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 DIRAS3O95661 229 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 LSM8O95777 96 aaKnown RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CALB1P05937 261 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 PROS1P07225 676 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 PRSS1P07477 247 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 BRCC3P46736 316 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 OR1G1P47890 313 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 TKTL1P51854 596 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 GEMP55040 296 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 HADHBP55084 474 aaKnown RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 SSTP61278 116 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 CNTN1Q12860 1018 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ELAVL2Q12926 359 aaKnown RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 MSLNQ13421 630 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 HEPACAMQ14CZ8 416 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 RBBP5Q15291 538 aaKnown RBP3.52□□□□□ -1.85
PTCD3-216ENST00000487043 WSCD1Q658N2 575 aa3.52□□□□□ -1.85
PTCD3-216ENST00000487043 ARHGAP17Q68EM7 881 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms