RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 GFRA1P56159 465 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 ZNHIT3Q15649 155 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 UGT3A2Q3SY77 523 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 ARL13AQ5H913 290 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 POMZP3Q6PJE2 187 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 ENPP6Q6UWR7 440 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 ADGRE4PQ86SQ3 457 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 MREGQ8N565 214 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 RELL2Q8NC24 303 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 NAXEQ8NCW5 288 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 TNIP2Q8NFZ5 429 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 OR4N2Q8NGD1 307 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 OR14L1PQ8NHC6 308 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 HOXB13Q92826 284 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 EFHD2Q96C19 240 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 MTERF3Q96E29 417 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 REEP4Q9H6H4 257 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 EML4Q9HC35 981 aaKnown RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 Q9N2J8 555 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 NTMQ9P121 344 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 SLC17A7Q9P2U7 560 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 CAMK2AQ9UQM7 478 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 L3MBTL1Q9Y468 752 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 TRAF6Q9Y4K3 522 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 DCHS2Q6V1P9 2916 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 OTOGQ6ZRI0 2925 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 FREM3P0C091 2139 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 KDM4EB2RXH2 506 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 SYT5O00445 386 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 FADS1O60427 444 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 IL2RAP01589 272 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 CYP4B1P13584 511 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 GRK2P25098 689 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 MAP3K8P41279 467 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ASMTP46597 345 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ASCL1P50553 236 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 PSMD4P55036 377 aaKnown RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 DLX5P56178 289 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 RCAN2Q14206 197 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 DECR1Q16698 335 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 RFTN2Q52LD8 501 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 WDR53Q7Z5U6 358 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 IFNEQ86WN2 208 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ZFP28Q8NHY6 868 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 TCP10LQ8TDR4 215 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 TWIST2Q8WVJ9 160 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 UCN2Q96RP3 112 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 MECRQ9BV79 373 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ACSS1Q9NUB1 689 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 TAS2R10Q9NYW0 307 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 FOXD3Q9UJU5 478 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 FBXL2Q9UKC9 423 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
CLDN11-207ENST00000486975 CBLCQ9ULV8 474 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
CLDN11-207ENST00000486975 B4DXG7 233 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 TYROBPO43914 113 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 IL33O95760 270 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 IL18BPO95998 194 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 LINC00032P0C843 101 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 DDX5P17844 614 aaKnown RBP13.08□□□□□ -0.32
CLDN11-207ENST00000486975 BMP5P22003 454 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 CHMP24386 653 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 EVI2BP34910 448 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 ZNF136P52737 540 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 RPL38P63173 70 aaKnown RBP13.08□□□□□ -0.32
CLDN11-207ENST00000486975 GAB1Q13480 694 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 BCL2A1Q16548 175 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 XKR7Q5GH72 579 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 CES4AQ5XG92 561 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 AAGABQ6PD74 315 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 LRIG3Q6UXM1 1119 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 ZNF551Q7Z340 670 aaPredicted RBP13.08□□□□□ -0.32
CLDN11-207ENST00000486975 TRIM42Q8IWZ5 723 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 FADS6Q8N9I5 356 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 LRRC46Q96FV0 321 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 TSSK3Q96PN8 268 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 C3orf14Q9HBI5 128 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 SDHAF3Q9NRP4 125 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 FIS1Q9Y3D6 152 aa13.08□□□□□ -0.32
CLDN11-207ENST00000486975 TMEM114B3SHH9 223 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 TMEM233B4DJY2 109 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 PIP5K1BO14986 540 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-207ENST00000486975 ZIC3O60481 467 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 SPAG7O75391 227 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 NKX2-2O95096 273 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 PRPS2P11908 318 aa13.07□□□□□ -0.32
CLDN11-207ENST00000486975 BCKDHAP12694 445 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms