RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RAB40BQ12829 278 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 RUNX2Q13950 521 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 DECR1Q16698 335 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 DEFB134Q4QY38 66 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 FCRL6Q6DN72 434 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 PLEKHM3Q6ZWE6 761 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 ACOT11Q8WXI4 607 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 PIK3R3Q92569 461 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 GUCD1Q96NT3 240 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 GAS2L1Q99501 681 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 CDX2Q99626 313 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 PRRG3Q9BZD7 231 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 MTHFD2LQ9H903 347 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 SMURF1Q9HCE7 757 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 PRDM9Q9NQV7 894 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 ANKMY1Q9P2S6 941 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 DAPP1Q9UN19 280 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 SSR3Q9UNL2 185 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 UNC80Q8N2C7 3258 aa16.81■□□□□ 0.28
PDLIM7-207ENST00000486828 KDM4EB2RXH2 506 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CTDSP2O14595 271 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 TNFRSF10CO14798 259 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 B3GALT2O43825 422 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 PTTG1O95997 202 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CPEP16870 476 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 MYL12AP19105 171 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 HNRNPA2B1P22626 353 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 FPR3P25089 353 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 TLX1P31314 330 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 STAT5AP42229 794 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 SIM1P81133 766 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 ARHGAP11BQ3KRB8 267 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 PUS10Q3MIT2 529 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 MINDY4Q4G0A6 757 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 LIPKQ5VXJ0 399 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 NKAIN4Q8IVV8 208 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 RBM12BQ8IXT5 1001 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC9A6Q92581 669 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 RNFT2Q96EX2 444 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 MRGPRX1Q96LB2 322 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CEP19Q96LK0 163 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 MCHR1Q99705 422 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 BARHL1Q9BZE3 327 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CLEC1BQ9P126 229 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 PTGFRNQ9P2B2 879 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 PILRAQ9UKJ1 303 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 OR5F1O95221 314 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 NTN1O95631 604 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 IMPDH2P12268 514 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 ACSL1P33121 698 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 RORCP51449 518 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 WNT4P56705 351 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 HOXC5Q00444 222 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CD300CQ08708 224 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 MAP4K2Q12851 820 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CBX3Q13185 183 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 TYW3Q6IPR3 259 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 FIGLAQ6QHK4 219 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 USP53Q70EK8 1073 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 GDF7Q7Z4P5 450 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 OR4N5Q8IXE1 308 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 PEX5LQ8IYB4 626 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 ANKK1Q8NFD2 765 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 FLCNQ8NFG4 579 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC41A3Q96GZ6 507 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC30A2Q9BRI3 323 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 CACYBPQ9HB71 228 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 ACTR10Q9NZ32 417 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 GPR52Q9Y2T5 361 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 WDR45Q9Y484 360 aa16.8■□□□□ 0.28
PDLIM7-207ENST00000486828 TMEM129A0AVI4 362 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 AQP9O43315 295 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 THY1P04216 161 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 CPMP14384 443 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 POLR2CP19387 275 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF10P21506 573 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 SRP54P61011 504 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 BNC1Q01954 994 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 DLX2Q07687 328 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 COL9A2Q14055 689 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 KIAA1324Q6UXG2 1013 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 CAMKVQ8NCB2 501 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 HTRA1Q92743 480 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 OSTF1Q92882 214 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 ZNF232Q9UNY5 417 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 CARD8Q9Y2G2 431 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 CAB39Q9Y376 341 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 SLC22A7Q9Y694 548 aa16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 MN1Q10571 1320 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-207ENST00000486828 STK25O00506 426 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 ZSCAN9O15535 394 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 KLF4O43474 513 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 DNAJB6O75190 326 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 TNFSF8P32971 234 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SOX18P35713 384 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 MTNR1AP48039 350 aa16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 SFSWAPQ12872 951 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-207ENST00000486828 KRR1Q13601 381 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms