RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 OCEL1Q9H607 264 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ACSS1Q9NUB1 689 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-216ENST00000486741 STMN3Q9NZ72 180 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SCML1Q9UN30 329 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 PPIEQ9UNP9 301 aaKnown RBP12.43□□□□□ -0.42
HMGN1-216ENST00000486741 CKAP5Q14008 2032 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 AGAP14A8MT82 685 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 C11orf98E9PRG8 122 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 WWP2O00308 870 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 HCRTR2O43614 444 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ATP12AP54707 1039 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 GMEB2Q9UKD1 530 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ICKQ9UPZ9 632 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SOBPA7XYQ1 873 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SCO2O43819 266 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 PRKNO60260 465 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-216ENST00000486741 DCKP27707 260 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 PYCR1P32322 319 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 DRD3P35462 400 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 AHRP35869 848 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 GIPRP48546 466 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 TAF13Q15543 124 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ALG10BQ5I7T1 473 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 OR2G6Q5TZ20 316 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF367Q7RTV3 350 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ETFBKMTQ8IXQ9 262 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SMPDL3BQ92485 455 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 MS4A6EQ96DS6 147 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 MRGPRX1Q96LB2 322 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SLC30A2Q9BRI3 323 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SAP130Q9H0E3 1048 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 C1GALT1Q9NS00 363 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 NTNG1Q9Y2I2 539 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 CDC14CA4D256 554 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PROM1O43490 865 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 OXSR1O95747 527 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CDK1P06493 297 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CXCR1P25024 350 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 TNFRSF4P43489 277 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PLAG1Q6DJT9 500 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 VWA5B2Q8N398 1253 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 OR5M11Q96RB7 305 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 GTPBP2Q9BX10 602 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 DSN1Q9H410 356 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CLDN24A6NM45 220 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 A8MV72 311 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 A8MVJ9 347 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 SLC16A6O15403 523 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CAPNS1P04632 268 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 TBC1D25Q3MII6 688 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 ENTPD8Q5MY95 495 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 RAB43Q86YS6 212 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 MCATQ8IVS2 390 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 AVL9Q8NBF6 648 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PROKR2Q8NFJ6 384 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 SLC7A13Q8TCU3 470 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 HSPA12BQ96MM6 686 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 TRNT1Q96Q11 434 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 MMP27Q9H306 513 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 NECTIN3Q9NQS3 549 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 SEC14L4Q9UDX3 406 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 ERVK-19Q9WJR5 959 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PDCD11Q14690 1871 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 OR2W5A6NFC9 320 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 UNC119BA6NIH7 251 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PLD2O14939 933 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PKLRP30613 574 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 BSGP35613 385 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PON3Q15166 354 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 DNAJC22Q8N4W6 341 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 OR52R1Q8NGF1 315 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 SLC37A2Q8TED4 501 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 HRASLS5Q96KN8 279 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 SRA1Q9HD15 236 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 SIRT5Q9NXA8 310 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 GNG8Q9UK08 70 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PADI2Q9Y2J8 665 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PSMD9O00233 223 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 FCMRO60667 390 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PRKAR1AP10644 381 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CPMP14384 443 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 OR1D4P47884 311 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CSNK1EP49674 416 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PUS10Q3MIT2 529 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 MEDAGQ5VYS4 303 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF544Q6NX49 715 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 KCNN2Q9H2S1 579 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 ACER3Q9NUN7 267 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 ZFR2Q9UPR6 939 aaKnown RBP12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PCDHGA6Q9Y5G7 932 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
HMGN1-216ENST00000486741 GVINP1Q7Z2Y8 2422 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms