RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FADDQ13158 208 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 ART3Q13508 389 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 NADK2Q4G0N4 442 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 GPAT3Q53EU6 434 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 TBCELQ5QJ74 424 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
NUP50-216ENST00000486184 SLC6A19Q695T7 634 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 FIGNL1Q6PIW4 674 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 PCSK4Q6UW60 755 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 LYPD8Q6UX82 237 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 Q6ZS92 163 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 RETREG3Q86VR2 466 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 PTRH1Q86Y79 214 aaKnown RBP10.48□□□□□ -0.73
NUP50-216ENST00000486184 TREML1Q86YW5 311 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 OR10G3Q8NGC4 313 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 OR52N2Q8NGI0 321 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 HOXB13Q92826 284 aaPredicted RBP10.48□□□□□ -0.73
NUP50-216ENST00000486184 RAB8BQ92930 207 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 ROPN1LQ96C74 230 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 SLC35A4Q96G79 324 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 SECISBP2Q96T21 854 aaKnown RBP10.48□□□□□ -0.73
NUP50-216ENST00000486184 CGREF1Q99674 301 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 SH3GL1Q99961 368 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 THUMPD3Q9BV44 507 aaKnown RBP10.48□□□□□ -0.73
NUP50-216ENST00000486184 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 EFCAB1Q9HAE3 211 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 CNIH4Q9P003 139 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 VAPAQ9P0L0 249 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 SLAMF8Q9P0V8 285 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 CSAG2Q9Y5P2 127 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 CNTRLQ7Z7A1 2325 aa10.48□□□□□ -0.73
NUP50-216ENST00000486184 LAMA5O15230 3695 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 C5orf58C9J3I9 102 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 NME2P1O60361 137 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 TSPAN2O60636 221 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 UGT2B11O75310 529 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 KCNK2O95069 426 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 NME2P22392 152 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 PTPN6P29350 595 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 LCN1P31025 176 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 MASP1P48740 699 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 MAN2A2P49641 1150 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 NUDT2P50583 147 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 KCNJ2P63252 427 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 GNA13Q14344 377 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 CAPRIN1Q14444 709 aaKnown RBP10.47□□□□□ -0.73
NUP50-216ENST00000486184 RGNQ15493 299 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 INAQ16352 499 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 CCNJQ5T5M9 372 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 PRAMEF20Q5VT98 475 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 DLEU7Q6UYE1 221 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 GALNTL5Q7Z4T8 443 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 MDGA2Q7Z553 956 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 GALNT10Q86SR1 603 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 FBXW8Q8N3Y1 598 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 ZNF527Q8NB42 609 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 SPPL2AQ8TCT8 520 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 PAQR8Q8TEZ7 354 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 LRRC58Q96CX6 371 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 SCMH1Q96GD3 660 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 ANKRD27Q96NW4 1050 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 SERHL2Q9H4I8 314 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 CACYBPQ9HB71 228 aaKnown RBP10.47□□□□□ -0.73
NUP50-216ENST00000486184 SLC25A37Q9NYZ2 338 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 LUZP4Q9P127 313 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 P2RX2Q9UBL9 471 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 TAGLN3Q9UI15 199 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 ANAPC2Q9UJX6 822 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 LIPT1Q9Y234 373 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 PCDHGB6Q9Y5F9 930 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 CHCHD2Q9Y6H1 151 aaPredicted RBP10.47□□□□□ -0.73
NUP50-216ENST00000486184 CFAP47Q6ZTR5 3102 aa10.47□□□□□ -0.73
NUP50-216ENST00000486184 NINQ8N4C6 2090 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 TRBV5-3A0A0A0MS03 114 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 C15orf38-AP3S2A0A0A6YYH1 394 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 PRAMEF25A6NGN4 478 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 G3V3Y1 287 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 HMGN4O00479 90 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 SCDO00767 359 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 SLC28A2O43868 658 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 PEX1O43933 1283 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 ICOSLGO75144 302 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 STX11O75558 287 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 UNC5CO95185 931 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 RASAL1O95294 804 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 UTS2O95399 124 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 CCL3P10147 92 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 NR2F1P10589 423 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 ESRRAP11474 423 aaPredicted RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 CYP4B1P13584 511 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 ETFAP13804 333 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 HOXB9P17482 250 aaPredicted RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 CNR1P21554 472 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 MNAT1P51948 309 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 MTPNP58546 118 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 GPR85P60893 370 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 PLGLB1Q02325 96 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 CYP51A1Q16850 503 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms