RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF223Q9UK11 482 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 PCDHGB4Q9UN71 923 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CLDN16Q9Y5I7 305 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 LRBAP50851 2863 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 EML6Q6ZMW3 1958 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 GTF3C1Q12789 2109 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 TCRBV5S2A0A599 114 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 CLIC1O00299 241 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 ADAM10O14672 748 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 AKAP10O43572 662 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 ASNA1O43681 348 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC35G6P0C7Q6 338 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 DRD2P14416 443 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 UQCRBP14927 111 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 PEX2P28328 305 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 MAGEA8P43361 318 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 GZMMP51124 257 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 WNT3P56703 355 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 MLF1P58340 268 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 MTPNP58546 118 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 GPR85P60893 370 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 VEZF1Q14119 521 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 HEPACAMQ14CZ8 416 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 EXT1Q16394 746 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 GRAMD1BQ3KR37 738 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 TBCELQ5QJ74 424 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 CCNYL2Q5T2Q4 361 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 INTS11Q5TA45 600 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 VN1R5Q7Z5H4 357 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 IFNEQ86WN2 208 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 NUDT13Q86X67 352 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 DOLPP1Q86YN1 238 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 RPRMLQ8N4K4 120 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF808Q8N4W9 903 aaPredicted RBP8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 OR7A2PQ8NGA2 310 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 C16orf78Q8WTQ4 265 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 CANT1Q8WVQ1 401 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 PPWD1Q96BP3 646 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 PPCDCQ96CD2 204 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF570Q96NI8 536 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 OR1F2PQ96R84 312 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 PKP2Q99959 881 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 TRIM8Q9BZR9 551 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 OR51B5Q9H339 312 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 DDX31Q9H8H2 851 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 PRDM9Q9NQV7 894 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 EGFL7Q9UHF1 273 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 RAB26Q9ULW5 256 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
TMEM39A-208ENST00000486159 IGKV3D-11A0A0A0MRZ8 115 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 TCRBV16S1A1N1A0A5B0 115 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 PINLYPA6NC86 204 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 SAGE2PA6NJ88 616 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 TMEM200CA6NKL6 621 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 CXCR6O00574 342 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 DENRO43583 198 aaKnown RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 DEAF1O75398 565 aaPredicted RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC25A12O75746 678 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 LRATO95237 230 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 KRT75O95678 551 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 KLK1P06870 262 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 RAP2AP10114 183 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 LAMP1P11279 417 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 DDCP20711 480 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ELAVL4P26378 380 aaKnown RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 BSGP35613 385 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ERFP50548 548 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 MAPK12P53778 367 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 STXBP1P61764 594 aaKnown RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 BTN3A2P78410 334 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 MRPS35P82673 323 aaKnown RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 CHRNB3Q05901 458 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 C2orf80Q0P641 193 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 MED21Q13503 144 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ADPRMQ3LIE5 342 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 LPCAT4Q643R3 524 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 Q6ZPB1 254 aaPredicted RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF621Q6ZSS3 439 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 MDGA2Q7Z553 956 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC30A8Q8IWU4 369 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 SULF2Q8IWU5 870 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 LILRA2Q8N149 483 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 RNF175Q8N4F7 328 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 MARVELD2Q8N4S9 558 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF321PQ8N8H1 164 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 APCDD1LQ8NCL9 501 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 OR10A6Q8NH74 314 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 EME1Q96AY2 570 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 LURAP1Q96LR2 239 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 RNF145Q96MT1 663 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 CSF3RQ99062 836 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 INPP5KQ9BT40 448 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 TBCDQ9BTW9 1192 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 BDH2Q9BUT1 245 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 C9orf16Q9BUW7 83 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 FAIM2Q9BWQ8 316 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ROGDIQ9GZN7 287 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 RPF2Q9H7B2 306 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms