RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ANKRD42Q8N9B4 389 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 TNIP2Q8NFZ5 429 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 RMND5BQ96G75 393 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-204ENST00000486023 C16orf58Q96GQ5 468 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 DSN1Q9H410 356 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 C3orf14Q9HBI5 128 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 MED11Q9P086 117 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 MRTO4Q9UKD2 239 aaKnown RBP16.07■□□□□ 0.16
COL6A1-204ENST00000486023 ABCA12Q86UK0 2595 aa16.07■□□□□ 0.16
COL6A1-204ENST00000486023 NCOA6Q14686 2063 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 FAM47E-STBD1D6RA91 191 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 SCAMP2O15127 329 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 KCNH1O95259 989 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 LAMP1P11279 417 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 BGNP21810 368 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 EVI2BP34910 448 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 CLK3P49761 638 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 ABCE1P61221 599 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 PSPHP78330 225 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 SNTB1Q13884 538 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 ACSF3Q4G176 576 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 CPTPQ5TA50 214 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 MARCH3Q86UD3 253 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 IFNEQ86WN2 208 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 HOMEZQ8IX15 550 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 KRTCAP2Q8N6L1 136 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 ZNF781Q8N8C0 355 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 CEP70Q8NHQ1 597 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 JADE3Q92613 823 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 NTNG2Q96CW9 530 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 WDYHV1Q96HA8 205 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 SFXN2Q96NB2 322 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 LMF2Q9BU23 707 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 NPDC1Q9NQX5 325 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 EIF3LQ9Y262 564 aaKnown RBP16.06■□□□□ 0.16
COL6A1-204ENST00000486023 NCKAP5O14513 1909 aa16.06■□□□□ 0.16
COL6A1-204ENST00000486023 A0A1W2PRB8 838 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 H0Y3Z8 333 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 IL33O95760 270 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 SERPINE1P05121 402 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 TUBBP07437 444 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 DDX5P17844 614 aaKnown RBP16.05■□□□□ 0.16
COL6A1-204ENST00000486023 BMP5P22003 454 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 DPP4P27487 766 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 SLC1A6P48664 564 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 PSMD4P55036 377 aaKnown RBP16.05■□□□□ 0.16
COL6A1-204ENST00000486023 PDE7AQ13946 482 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 MPP2Q14168 576 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL6A1-204ENST00000486023 PGS1Q32NB8 556 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 SPDYE7PQ495Y7 208 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 XKR7Q5GH72 579 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 RIPPLY2Q5TAB7 128 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 HHATQ5VTY9 493 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 FIGNL1Q6PIW4 674 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 PLXDC2Q6UX71 529 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 LRIG3Q6UXM1 1119 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 SEM1Q6ZVN7 128 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 ZNF295-AS1Q8N0V1 137 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 MGARPQ8TDB4 240 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 DUSP19Q8WTR2 217 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 MTERF3Q96E29 417 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 SPOCK3Q9BQ16 436 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 TRIM8Q9BZR9 551 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 PRDM14Q9GZV8 571 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 ATP6V1HQ9UI12 483 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 PCDHGB3Q9Y5G1 929 aa16.05■□□□□ 0.16
COL6A1-204ENST00000486023 HSPB2A8KAH6 182 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 TM9SF1O15321 606 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 BIRC5O15392 142 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 CFLARO15519 480 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 EMC8O43402 210 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 TBX19O60806 448 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 ZWINTO95229 277 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 UTS2O95399 124 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 PSMG1O95456 288 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 EPPINO95925 133 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 ACTL6AO96019 429 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 IL2RAP01589 272 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 SRD5A2P31213 254 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 GAS1P54826 345 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 STX3Q13277 289 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 RCAN2Q14206 197 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 HSPB2Q16082 182 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 VPS26BQ4G0F5 336 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 NHSL2Q5HYW2 709 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 ENPP6Q6UWR7 440 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 CDRT4Q8N9R6 151 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 NAXEQ8NCW5 288 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 OR5M1Q8NGP8 315 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 OR6Y1Q8NGX8 325 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 PRPF18Q99633 342 aaKnown RBP16.04■□□□□ 0.16
COL6A1-204ENST00000486023 TBL1XR1Q9BZK7 514 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 C20orf27Q9GZN8 174 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 ENKD1Q9H0I2 346 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 SSU72Q9NP77 194 aaKnown RBP16.04■□□□□ 0.16
COL6A1-204ENST00000486023 SDHAF3Q9NRP4 125 aa16.04■□□□□ 0.16
COL6A1-204ENST00000486023 ACSS1Q9NUB1 689 aaPredicted RBP16.04■□□□□ 0.16
COL6A1-204ENST00000486023 ZCCHC3Q9NUD5 404 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms