RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 A8MVJ9 347 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SDHDO14521 159 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SUSD5O60279 629 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OR10H2O60403 315 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 FADS1O60427 444 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 PPM1BO75688 479 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 ATP6AP2O75787 350 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NKX2-2O95096 273 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 MYZAPP0CAP1 466 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 HOXB9P17482 250 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 AGAP20933 346 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 IL12AP29459 219 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NOS3P29474 1203 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SLC1A6P48664 564 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 MRPL19P49406 292 aaKnown RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 MAN2A2P49641 1150 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CDK9P50750 372 aaKnown RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 PNLIPRP2P54317 469 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CLDN8P56748 225 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 MAGOHP61326 146 aaKnown RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 ADORA2A-AS1P86434 159 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OC90Q02509 493 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 FUT5Q11128 374 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 GAB1Q13480 694 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 PTGR1Q14914 329 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 RPS6KA2Q15349 733 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CHI3L2Q15782 390 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 MAPKAPK3Q16644 382 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CYP27C1Q4G0S4 372 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NHSL2Q5HYW2 709 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SPDYAQ5MJ70 313 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CGB2Q6NT52 195 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 ZCCHC12Q6PEW1 402 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 PLXDC2Q6UX71 529 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SLC29A4Q7RTT9 530 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NUP54Q7Z3B4 507 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TAGAPQ8N103 731 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TMEM251Q8N6I4 163 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 KRTCAP2Q8N6L1 136 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NATD1Q8N6N6 113 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OR10G3Q8NGC4 313 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OR4N2Q8NGD1 307 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OR52R1Q8NGF1 315 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OR8J2Q8NGG1 315 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OR52N2Q8NGI0 321 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 GOT1L1Q8NHS2 421 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 SLC22A8Q8TCC7 542 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SPPL2AQ8TCT8 520 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 WFDC12Q8WWY7 111 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 STON2Q8WXE9 905 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 ASB15Q8WXK1 588 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 KAT2AQ92830 837 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TMEM125Q96AQ2 219 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TESCQ96BS2 214 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 OTUB1Q96FW1 271 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 TMEM41AQ96HV5 264 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 C5orf34Q96MH7 638 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NODALQ96S42 347 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 DMRTA2Q96SC8 542 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 C1orf50Q9BV19 199 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CNPPD1Q9BV87 410 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TMPRSS13Q9BYE2 586 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TTTY12Q9BZ98 90 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 BRINP2Q9C0B6 783 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 ZNF703Q9H7S9 590 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 KLHL1Q9NR64 748 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SLC6A13Q9NSD5 602 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SACM1LQ9NTJ5 587 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 THAP1Q9NVV9 213 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 HPF1Q9NWY4 346 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 TUBA8Q9NY65 449 aaPredicted RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 SPRR3Q9UBC9 169 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 PRODH2Q9UF12 536 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 BAIAP2L1Q9UHR4 511 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 SLC5A6Q9Y289 635 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 MRPS18CQ9Y3D5 142 aaKnown RBP5.23□□□□□ -1.57
CUX1-208ENST00000485792 FIS1Q9Y3D6 152 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 ZNF780BQ9Y6R6 833 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 CELSR1Q9NYQ6 3014 aa5.23□□□□□ -1.57
CUX1-208ENST00000485792 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 MAP1AP78559 2803 aaPredicted RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 MYO9AB2RTY4 2548 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PLCE1Q9P212 2302 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 IGLV3-32A0A0A0MS00 114 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 A0A1B0GUH1 482 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PRAMEF27A3QJZ7 478 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 WDR91A4D1P6 747 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 OR14I1A6ND48 311 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SCAMP2O15127 329 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 HCN1O60741 890 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SLC19A2O60779 497 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 ICOSLGO75144 302 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 PEX11AO75192 247 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 UGT2B11O75310 529 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 BCAS1O75363 584 aaPredicted RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 ERN1O75460 977 aaKnown RBP5.22□□□□□ -1.57
CUX1-208ENST00000485792 ALX3O95076 343 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 UNC5CO95185 931 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 SNX4O95219 450 aa5.22□□□□□ -1.57
CUX1-208ENST00000485792 CHEK2O96017 543 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms