RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 FIG4Q92562 907 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ROPN1LQ96C74 230 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ZNF689Q96CS4 500 aaPredicted RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 SGF29Q96ES7 293 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 PDLIM5Q96HC4 596 aaKnown RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 MED30Q96HR3 178 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 CNDP2Q96KP4 475 aaKnown RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 B3GALT6Q96L58 329 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 CATSPER2Q96P56 530 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 PANX3Q96QZ0 392 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 OR52B2Q96RD2 323 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 SLC22A12Q96S37 553 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ZNF184Q99676 751 aaPredicted RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 HOPXQ9BPY8 73 aaPredicted RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 FEM1AQ9BSK4 669 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 WACQ9BTA9 647 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 TRIM15Q9C019 465 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 MMP27Q9H306 513 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ZNF385DQ9H6B1 395 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ALG9Q9H6U8 611 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 WDR55Q9H6Y2 383 aaPredicted RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ATP13A3Q9H7F0 1226 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 WDR41Q9HAD4 459 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 CCDC177Q9NQR7 707 aaPredicted RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 MBNL1Q9NR56 388 aaKnown RBP4.37□□□□□ -1.71
SPTA1-207ENST00000485680 GID8Q9NWU2 228 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 NMRK1Q9NWW6 199 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 NUDT4Q9NZJ9 180 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 GNPTGQ9UJJ9 305 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 ZNF580Q9UK33 172 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 POMPQ9Y244 141 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 VDAC3Q9Y277 283 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 NDUFAF1Q9Y375 327 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 UTRNP46939 3433 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 FRMPD3Q5JV73 1810 aa4.37□□□□□ -1.71
SPTA1-207ENST00000485680 OR2M5A3KFT3 312 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 OR5K3A6NET4 321 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 URADA6NGE7 173 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 LILRA5A6NI73 299 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 C4orf47A7E2U8 309 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 HNRNPCL2B2RXH8 293 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SUPT3HB4E1H0 165 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 PRMT5O14744 637 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 RAD51BO15315 384 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 ADAM12O43184 909 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SPRY1O43609 319 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 ZBTB14O43829 449 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 LDB3O75112 727 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SUPT3HO75486 399 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 PGLSO95336 258 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SEC24AO95486 1093 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 OLFM2O95897 454 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 IGSF6O95976 241 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 NPPAP01160 153 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 UROSP10746 265 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 IDO1P14902 403 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 GJA1P17302 382 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 LBPP18428 481 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 POLR2CP19387 275 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 MSH3P20585 1137 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 RPS3P23396 243 aaKnown RBP eCLIP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 DGKAP23743 735 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 CPT2P23786 658 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 GABRA5P31644 462 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 MC5RP33032 325 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 PSMD8P48556 350 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 MRPL19P49406 292 aaKnown RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 PLK1P53350 603 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 CTSCP53634 463 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SH3BGRP55822 239 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SNRPD1P62314 119 aaKnown RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 POLR2LP62875 67 aaKnown RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 FLOT2Q14254 428 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 FASTKQ14296 549 aaKnown RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 DMC1Q14565 340 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 ZNF234Q14588 700 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 MELKQ14680 651 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SNAPC1Q16533 368 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 KIF19Q2TAC6 998 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 AGKQ53H12 422 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 UNC50Q53HI1 259 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 ZNF789Q5FWF6 425 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 CDKL4Q5MAI5 379 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 IRAK1BP1Q5VVH5 260 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 PTRHD1Q6GMV3 140 aaKnown RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 ASB18Q6ZVZ8 466 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 FRA10AC1Q70Z53 315 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 SNX20Q7Z614 316 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 DHDDSQ86SQ9 333 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 TMEM173Q86WV6 379 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 C1orf52Q8N6N3 182 aaKnown RBP4.36□□□□□ -1.71
SPTA1-207ENST00000485680 LEMD2Q8NC56 503 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 ICA1LQ8NDH6 482 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 OR52K2Q8NGK3 314 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 OR13C4Q8NGS5 318 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 FIBINQ8TAL6 211 aa4.36□□□□□ -1.71
SPTA1-207ENST00000485680 MAPK15Q8TD08 544 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms