RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TPD52P55327 224 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 PKNOX1P55347 436 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 CLDN15P56746 228 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 PSPHP78330 225 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 MRPS22P82650 360 aaKnown RBP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 CHMP1BQ7LBR1 199 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 SLC22A9Q8IVM8 553 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 CNEP1R1Q8N9A8 125 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 OR2M3Q8NG83 312 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 OR5M1Q8NGP8 315 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 SMPDL3BQ92485 455 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 FIG4Q92562 907 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 L3HYPDHQ96EM0 354 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 RTN4RQ9BZR6 473 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 GSTO2Q9H4Y5 243 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 NDRG3Q9UGV2 375 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 NFU1Q9UMS0 254 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 TESMINQ9Y4I5 508 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 SLC22A20A6NK97 555 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 MSTNO14793 375 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 FADS1O60427 444 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 ABHD2P08910 425 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 SUCLG1P53597 346 aaKnown RBP17.37■□□□□ 0.37
COL27A1-205ENST00000485397 STX5Q13190 355 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 GLE1Q53GS7 698 aaKnown RBP17.37■□□□□ 0.37
COL27A1-205ENST00000485397 SPDYAQ5MJ70 313 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 RAET1LQ5VY80 246 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 TMEM107Q6UX40 140 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 Q71RC1 249 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-205ENST00000485397 BTLAQ7Z6A9 289 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 WFIKKN1Q96NZ8 548 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 MID1IP1Q9NPA3 183 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 BEX4Q9NWD9 120 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-205ENST00000485397 SIRT5Q9NXA8 310 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 C6orf203Q9P0P8 240 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-205ENST00000485397 EIF3LQ9Y262 564 aaKnown RBP17.37■□□□□ 0.37
COL27A1-205ENST00000485397 STK38LQ9Y2H1 464 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 ZNF337Q9Y3M9 751 aa17.37■□□□□ 0.37
COL27A1-205ENST00000485397 FLNAP21333 2647 aaKnown RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 SERTM1A2A2V5 107 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 UBFD1O14562 309 aaKnown RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 SIAH2O43255 324 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 COQ9O75208 318 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 CRHP06850 196 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 SIRPAP78324 504 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 NKX6-1P78426 367 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 ZNF763Q0D2J5 394 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 OR2A2Q6IF42 318 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 FAM71E1Q6IPT2 247 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 ZNF474Q6S9Z5 364 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 LCA5Q86VQ0 697 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 CXorf67Q86X51 503 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 MEIOBQ8N635 442 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 CCNYL1Q8N7R7 359 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 MNS1Q8NEH6 495 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 PGM2Q96G03 612 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 OPN3Q9H1Y3 402 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 GLIPR2Q9H4G4 154 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 KLHL28Q9NXS3 571 aa17.36■□□□□ 0.37
COL27A1-205ENST00000485397 C19orf53Q9UNZ5 99 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 POLR3HQ9Y535 204 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-205ENST00000485397 A0A087WV62 115 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 CCDC151A5D8V7 595 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 UPK1AO00322 258 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 SEC14L5O43304 696 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 RIPK2O43353 540 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 PYGBP11216 843 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 CD79BP40259 229 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 KIR2DL2P43627 348 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-205ENST00000485397 GSTM5P46439 218 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 CYP27C1Q4G0S4 372 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 BIVMQ86UB2 503 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 MARCH3Q86UD3 253 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL27A1-205ENST00000485397 C18orf12Q96KH6 178 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 FAM111AQ96PZ2 611 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 PINK1Q9BXM7 581 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 SHCBP1LQ9BZQ2 653 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 SDHAF3Q9NRP4 125 aa17.35■□□□□ 0.37
COL27A1-205ENST00000485397 OR2M5A3KFT3 312 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 DEFB108AA8MXU0 73 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 CTIFO43310 598 aaKnown RBP17.34■□□□□ 0.37
COL27A1-205ENST00000485397 RFX3P48380 749 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 CLDN20P56880 219 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 LTBQ06643 244 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 DECR1Q16698 335 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 IMPG1Q17R60 797 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 TRMT10CQ7L0Y3 403 aaKnown RBP17.34■□□□□ 0.37
COL27A1-205ENST00000485397 ACMSDQ8TDX5 336 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 DUSP19Q8WTR2 217 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 ZNF845Q96IR2 970 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-205ENST00000485397 Q9N2J8 555 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 MIEF1Q9NQG6 463 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 DDX18Q9NVP1 670 aaKnown RBP17.34■□□□□ 0.37
COL27A1-205ENST00000485397 TAS2R7Q9NYW3 318 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 EMCNQ9ULC0 261 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 GRID1Q9ULK0 1009 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 ABCG2Q9UNQ0 655 aa17.34■□□□□ 0.37
COL27A1-205ENST00000485397 PCNX3Q9H6A9 2034 aa17.33■□□□□ 0.37
COL27A1-205ENST00000485397 G3V2L1 256 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms