RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 AMZ2Q86W34 360 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 PYROXD2Q8N2H3 581 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 DCLK2Q8N568 766 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 BEST4Q8NFU0 473 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 PCNPQ8WW12 178 aaKnown RBP3.3□□□□□ -1.88
VPS8-223ENST00000485024 P3H4Q92791 437 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 ANKRD9Q96BM1 317 aaPredicted RBP3.3□□□□□ -1.88
VPS8-223ENST00000485024 COG3Q96JB2 828 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 DEFB118Q96PH6 123 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 ALKBH3Q96Q83 286 aaPredicted RBP3.3□□□□□ -1.88
VPS8-223ENST00000485024 TXN2Q99757 166 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 OVOL2Q9BRP0 275 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 WDR76Q9H967 626 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 ACTR8Q9H981 624 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 NDE1Q9NXR1 346 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 CGNQ9P2M7 1197 aaKnown RBP3.3□□□□□ -1.88
VPS8-223ENST00000485024 EXTL2Q9UBQ6 330 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 MIOXQ9UGB7 285 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 ATP6V1HQ9UI12 483 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 LAMP5Q9UJQ1 280 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 SLC9A8Q9Y2E8 581 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 XIRP2A4UGR9 3374 aa3.3□□□□□ -1.88
VPS8-223ENST00000485024 FBN2P35556 2912 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 SYNJ2BP-COX16A0A087WUM0 186 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 OR5H15A6NDH6 313 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 SRRM4A7MD48 611 aaKnown RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 NPIPB9F8W1W9 429 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 K7EQD1 137 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 SH2D1BO14796 132 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 CHADO15335 359 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 GMFGO60234 142 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ANP32DO95626 131 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 PCCBP05166 539 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 FHP07954 510 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 PATE4P0C8F1 98 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 FAM200BP0CF97 657 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 CALML3P27482 149 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 OTX2P32243 289 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 MMP12P39900 470 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 IFNAR2P48551 515 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 SLC1A6P48664 564 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 TMEM50BP56557 158 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 BTG1P62324 171 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 GNB1P62873 340 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 PPIAP62937 165 aaKnown RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 NOP14P78316 857 aaKnown RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 OVGP1Q12889 678 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ZNF177Q13360 481 aaPredicted RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 UPP1Q16831 310 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 TATDN3Q17R31 274 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ECSCRQ19T08 205 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 HKDC1Q2TB90 917 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 DCAF4L1Q3SXM0 396 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ATAD3BQ5T9A4 648 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 RHBDD2Q6NTF9 364 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 KIF6Q6ZMV9 814 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 PAQR9Q6ZVX9 377 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 CENPUQ71F23 418 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 P4HA3Q7Z4N8 544 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ITIH5Q86UX2 942 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 CNPY4Q8N129 248 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 FADS6Q8N9I5 356 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 WDR36Q8NI36 951 aaKnown RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 CCDC51Q96ER9 411 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 ACCSQ96QU6 501 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 LGMNQ99538 433 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 YAE1D1Q9NRH1 226 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 SNX6Q9UNH7 406 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 SLC6A5Q9Y345 797 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 MRPS18CQ9Y3D5 142 aaKnown RBP3.29□□□□□ -1.88
VPS8-223ENST00000485024 MFHAS1Q9Y4C4 1052 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 TJP1Q07157 1748 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 E9PCH4 1651 aa3.29□□□□□ -1.88
VPS8-223ENST00000485024 PLXNA3P51805 1871 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 HECTD1Q9ULT8 2610 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 KALRNO60229 2985 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 ZFYVE26Q68DK2 2539 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 C4BP0C0L5 1744 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 KIF16BQ96L93 1317 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 CDHR2Q9BYE9 1310 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 ABCA2Q9BZC7 2435 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 LOC390937A0A1W2PQ73 354 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 WASH3PC4AMC7 463 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 ANHXE9PGG2 379 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 NEDD8-MDP1E9PL57 170 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 MCF2LO15068 1137 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 TBX19O60806 448 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 STK17BO94768 372 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 TRIM49P0CI25 452 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 TRIM49CP0CI26 452 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 ADORA3P0DMS8 318 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 KRT13P13646 458 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 UQCRBP14927 111 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 AOC1P19801 751 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 IL4RP24394 825 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 PSMA2P25787 234 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 PDHA2P29803 388 aa3.28□□□□□ -1.88
VPS8-223ENST00000485024 RPL27P61353 136 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms